RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PNMA5Q96PV4 448 aa22.81■■□□□ 1.24
MRPL40-201ENST00000333130 CCDC39Q9UFE4 941 aa22.81■■□□□ 1.24
MRPL40-201ENST00000333130 RANBP2P49792 3224 aaKnown RBP22.81■■□□□ 1.24
MRPL40-201ENST00000333130 MICAL3Q7RTP6 2002 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 ZBBXA8MT70 800 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 BAIAP3O94812 1187 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 EYA4O95677 639 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 GHRP10912 638 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 CRYBB1P53674 252 aaPredicted RBP22.8■■□□□ 1.24
MRPL40-201ENST00000333130 EPHB4P54760 987 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 NLRP11P59045 1033 aaKnown RBP22.8■■□□□ 1.24
MRPL40-201ENST00000333130 MBTPS1Q14703 1052 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 KIZQ2M2Z5 673 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 FBXO47Q5MNV8 452 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 ADALQ6DHV7 355 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 NLRP7Q8WX94 980 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 IFIH1Q9BYX4 1025 aaKnown RBP22.8■■□□□ 1.24
MRPL40-201ENST00000333130 BHMT2Q9H2M3 363 aa22.8■■□□□ 1.24
MRPL40-201ENST00000333130 BMP2KQ9NSY1 1161 aaPredicted RBP22.8■■□□□ 1.24
MRPL40-201ENST00000333130 ASAP2O43150 1006 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 IKBKEQ14164 716 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 MXD4Q14582 209 aaPredicted RBP22.79■■□□□ 1.24
MRPL40-201ENST00000333130 SHHQ15465 462 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 PLEKHG4Q58EX7 1191 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 RESP18Q5W5W9 173 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 FAM43BQ6ZT52 329 aaPredicted RBP22.79■■□□□ 1.24
MRPL40-201ENST00000333130 OTOP2Q7RTS6 562 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 ZNF410Q86VK4 478 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 RHPN2Q8IUC4 686 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 HERVK_113Q902F9 699 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 PPP1R16BQ96T49 567 aa22.79■■□□□ 1.24
MRPL40-201ENST00000333130 MYH11P35749 1972 aa22.78■■□□□ 1.24
MRPL40-201ENST00000333130 KCNJ6P48051 423 aa22.78■■□□□ 1.24
MRPL40-201ENST00000333130 GPC3P51654 580 aa22.78■■□□□ 1.24
MRPL40-201ENST00000333130 PAK2Q13177 524 aa22.78■■□□□ 1.24
MRPL40-201ENST00000333130 KARSQ15046 597 aaKnown RBP22.78■■□□□ 1.24
MRPL40-201ENST00000333130 PADI6Q6TGC4 694 aa22.78■■□□□ 1.24
MRPL40-201ENST00000333130 TMEM87AQ8NBN3 555 aa22.78■■□□□ 1.24
MRPL40-201ENST00000333130 OSMRQ99650 979 aa22.78■■□□□ 1.24
MRPL40-201ENST00000333130 COL4A3BPQ9Y5P4 624 aa22.78■■□□□ 1.24
MRPL40-201ENST00000333130 A0A087WWV3 80 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 ABHD14A-ACY1A0A1B0GW23 586 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 RPS6KA5O75582 802 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 TFDP1Q14186 410 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 LPIN1Q14693 890 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 C9orf50Q5SZB4 431 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 C16orf59Q7L2K0 433 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 KCNK18Q7Z418 384 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 LRRC15Q8TF66 581 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 TMEM143Q96AN5 459 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 NLRP4Q96MN2 994 aa22.77■■□□□ 1.24
MRPL40-201ENST00000333130 GCOM2Q9BZD3 368 aaPredicted RBP22.77■■□□□ 1.24
MRPL40-201ENST00000333130 INO80BQ9C086 356 aaPredicted RBP22.77■■□□□ 1.24
MRPL40-201ENST00000333130 A0A1W2PQ27 194 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 A0A1W2PQ64 194 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 A0A1W2PQD8 194 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 E9PMD0 336 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 GPR182O15218 404 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 GPR32O75388 356 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 SSBP05455 408 aaKnown RBP eCLIP22.76■■□□□ 1.23
MRPL40-201ENST00000333130 PLCG1P19174 1290 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 CMA1P23946 247 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 DRP2Q13474 957 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 DBF4BQ8NFT6 615 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 PRPF31Q8WWY3 499 aaKnown RBP22.76■■□□□ 1.23
MRPL40-201ENST00000333130 PLIN2Q99541 437 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 FTHL17Q9BXU8 183 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 A0A087X0B3 334 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 FAM237AA0A1B0GTK4 181 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 CYP11B2P19099 503 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 MKRN4PQ13434 485 aaPredicted RBP22.76■■□□□ 1.23
MRPL40-201ENST00000333130 GPNMBQ14956 572 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 CSPP1Q1MSJ5 1256 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 FAM102BQ5T8I3 360 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 TIPINQ9BVW5 301 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 POLR3FQ9H1D9 316 aaPredicted RBP22.76■■□□□ 1.23
MRPL40-201ENST00000333130 XPNPEP1Q9NQW7 623 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 KCND2Q9NZV8 630 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 SLC4A7Q9Y6M7 1214 aa22.76■■□□□ 1.23
MRPL40-201ENST00000333130 SFPQP23246 707 aaKnown RBP eCLIP22.75■■□□□ 1.23
MRPL40-201ENST00000333130 EIF4BP23588 611 aaKnown RBP22.75■■□□□ 1.23
MRPL40-201ENST00000333130 CD52P31358 61 aa22.75■■□□□ 1.23
MRPL40-201ENST00000333130 LAMTOR4Q0VGL1 99 aa22.75■■□□□ 1.23
MRPL40-201ENST00000333130 CCDC73Q6ZRK6 1079 aa22.75■■□□□ 1.23
MRPL40-201ENST00000333130 KIFAP3Q92845 792 aa22.75■■□□□ 1.23
MRPL40-201ENST00000333130 ADAMTS10Q9H324 1103 aa22.75■■□□□ 1.23
MRPL40-201ENST00000333130 BLOC1S4Q9NUP1 217 aa22.75■■□□□ 1.23
MRPL40-201ENST00000333130 STK17AQ9UEE5 414 aa22.75■■□□□ 1.23
MRPL40-201ENST00000333130 HPSEQ9Y251 543 aa22.75■■□□□ 1.23
MRPL40-201ENST00000333130 PLA2G4BP0C869 781 aa22.74■■□□□ 1.23
MRPL40-201ENST00000333130 PHKA2P46019 1235 aa22.74■■□□□ 1.23
MRPL40-201ENST00000333130 NFX1Q12986 1120 aaKnown RBP22.74■■□□□ 1.23
MRPL40-201ENST00000333130 PPP2R5AQ15172 486 aa22.74■■□□□ 1.23
MRPL40-201ENST00000333130 NAALADL2Q58DX5 795 aa22.74■■□□□ 1.23
MRPL40-201ENST00000333130 RRAGBQ5VZM2 374 aa22.74■■□□□ 1.23
MRPL40-201ENST00000333130 MAEAQ7L5Y9 396 aa22.74■■□□□ 1.23
MRPL40-201ENST00000333130 VWCEQ96DN2 955 aa22.74■■□□□ 1.23
MRPL40-201ENST00000333130 SLC9A7Q96T83 725 aa22.74■■□□□ 1.23
MRPL40-201ENST00000333130 FAM13BQ9NYF5 915 aa22.74■■□□□ 1.23
MRPL40-201ENST00000333130 PADI3Q9ULW8 664 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms