RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MTRF1LQ9UGC7 380 aaKnown RBP26.29■■□□□ 1.8
SOX1-201ENST00000330949 AMFRQ9UKV5 643 aa26.29■■□□□ 1.8
SOX1-201ENST00000330949 TECP42680 631 aa26.29■■□□□ 1.8
SOX1-201ENST00000330949 TUBP50607 506 aa26.29■■□□□ 1.8
SOX1-201ENST00000330949 MKRN3Q13064 507 aaKnown RBP26.29■■□□□ 1.8
SOX1-201ENST00000330949 CUL3Q13618 768 aa26.29■■□□□ 1.8
SOX1-201ENST00000330949 AUHQ13825 339 aaKnown RBP26.29■■□□□ 1.8
SOX1-201ENST00000330949 TMEM154Q6P9G4 183 aa26.29■■□□□ 1.8
SOX1-201ENST00000330949 LARP4BQ92615 738 aaKnown RBP26.29■■□□□ 1.8
SOX1-201ENST00000330949 EPAS1Q99814 870 aa26.29■■□□□ 1.8
SOX1-201ENST00000330949 BAZ2AQ9UIF9 1905 aaKnown RBP26.29■■□□□ 1.8
SOX1-201ENST00000330949 ATP5HO75947 161 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 BAG3O95817 575 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 ANXA13P27216 316 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 SLCO1A2P46721 670 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 PEX5P50542 639 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 RNF43Q68DV7 783 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 ARHGAP22Q7Z5H3 698 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 IRF2BP2Q7Z5L9 587 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 TPBGLP0DKB5 382 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 LRRC14Q15048 493 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 ZCWPW2Q504Y3 356 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 TRIM59Q8IWR1 403 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.28■■□□□ 1.8
SOX1-201ENST00000330949 BICD1Q96G01 975 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 SEMA4AQ9H3S1 761 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 PIDD1Q9HB75 910 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 BLOC1S4Q9NUP1 217 aa26.28■■□□□ 1.8
SOX1-201ENST00000330949 ZMYND8Q9ULU4 1186 aaPredicted RBP26.28■■□□□ 1.8
SOX1-201ENST00000330949 PEX11AO75192 247 aa26.27■■□□□ 1.8
SOX1-201ENST00000330949 H2AFZP0C0S5 128 aa26.27■■□□□ 1.8
SOX1-201ENST00000330949 ZDHHC24Q6UX98 284 aa26.27■■□□□ 1.8
SOX1-201ENST00000330949 H2AFVQ71UI9 128 aa26.27■■□□□ 1.8
SOX1-201ENST00000330949 TFCP2L1Q9NZI6 479 aa26.27■■□□□ 1.8
SOX1-201ENST00000330949 PARP2Q9UGN5 583 aa26.27■■□□□ 1.8
SOX1-201ENST00000330949 CCNT1O60563 726 aaKnown RBP26.27■■□□□ 1.8
SOX1-201ENST00000330949 CLUL1Q15846 466 aa26.27■■□□□ 1.8
SOX1-201ENST00000330949 EXOC3L1Q86VI1 746 aa26.27■■□□□ 1.8
SOX1-201ENST00000330949 AGGF1Q8N302 714 aaeCLIP26.27■■□□□ 1.8
SOX1-201ENST00000330949 SNX24Q9Y343 169 aa26.27■■□□□ 1.8
SOX1-201ENST00000330949 KIAA0391O15091 583 aaKnown RBP26.26■■□□□ 1.79
SOX1-201ENST00000330949 CYP2D6P10635 497 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 SP100P23497 879 aaPredicted RBP26.26■■□□□ 1.79
SOX1-201ENST00000330949 MARSP56192 900 aaKnown RBP26.26■■□□□ 1.79
SOX1-201ENST00000330949 VPS36Q86VN1 386 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 JAMLQ86YT9 394 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 MGARPQ8TDB4 240 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 UTP4Q969X6 686 aaKnown RBP26.26■■□□□ 1.79
SOX1-201ENST00000330949 RMDN2Q96LZ7 410 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 ROPN1BQ9BZX4 212 aaPredicted RBP26.26■■□□□ 1.79
SOX1-201ENST00000330949 LRRC27Q9C0I9 530 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 ROPN1Q9HAT0 212 aaPredicted RBP26.26■■□□□ 1.79
SOX1-201ENST00000330949 INTUQ9ULD6 942 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 NR2E1Q9Y466 385 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 LRRC41Q15345 812 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 ERFEQ4G0M1 354 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 ENDOVQ8N8Q3 282 aaKnown RBP26.26■■□□□ 1.79
SOX1-201ENST00000330949 BORCS6Q96GS4 357 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 CDK5RAP3Q96JB5 506 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 RPS6KC1Q96S38 1066 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 LRMDAQ9H2I8 198 aa26.26■■□□□ 1.79
SOX1-201ENST00000330949 CAMTA2O94983 1202 aa26.25■■□□□ 1.79
SOX1-201ENST00000330949 LETM2Q2VYF4 491 aa26.25■■□□□ 1.79
SOX1-201ENST00000330949 BARGINQ6ZT62 677 aa26.25■■□□□ 1.79
SOX1-201ENST00000330949 ASAP3Q8TDY4 903 aa26.25■■□□□ 1.79
SOX1-201ENST00000330949 DNAJC9Q8WXX5 260 aa26.25■■□□□ 1.79
SOX1-201ENST00000330949 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.25■■□□□ 1.79
SOX1-201ENST00000330949 DBR1Q9UK59 544 aaKnown RBP26.25■■□□□ 1.79
SOX1-201ENST00000330949 MYBL1P10243 752 aa26.25■■□□□ 1.79
SOX1-201ENST00000330949 MAPK7Q13164 816 aa26.25■■□□□ 1.79
SOX1-201ENST00000330949 NLRP3Q96P20 1036 aa26.25■■□□□ 1.79
SOX1-201ENST00000330949 TRAPPC9Q96Q05 1148 aa26.25■■□□□ 1.79
SOX1-201ENST00000330949 LOC102724428A0A0B4J2F2 783 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 TMEM120BA0PK00 339 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 RIPK2O43353 540 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 SIK1P57059 783 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 GRB10Q13322 594 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 DYNC1I2Q13409 638 aaKnown RBP26.24■■□□□ 1.79
SOX1-201ENST00000330949 ACVR2BQ13705 512 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 CKAP2Q8WWK9 683 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 GLG1Q92896 1179 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 NUDCD1Q96RS6 583 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.24■■□□□ 1.79
SOX1-201ENST00000330949 KCNQ2O43526 872 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 NTSR2O95665 410 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 PRPF4BQ13523 1007 aaKnown RBP26.24■■□□□ 1.79
SOX1-201ENST00000330949 ZNF384Q8TF68 577 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 RUNDC3BQ96NL0 473 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 PAIP2Q9BPZ3 127 aaKnown RBP26.24■■□□□ 1.79
SOX1-201ENST00000330949 RIOK1Q9BRS2 568 aaKnown RBP26.24■■□□□ 1.79
SOX1-201ENST00000330949 MAP3K13O43283 966 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 ATP5DP30049 168 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 IRGCQ6NXR0 463 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 SLC17A8Q8NDX2 589 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 UHMK1Q8TAS1 419 aaKnown RBP26.24■■□□□ 1.79
SOX1-201ENST00000330949 FAM81AQ8TBF8 368 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 DTNBP1Q96EV8 351 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 CARD9Q9H257 536 aa26.24■■□□□ 1.79
SOX1-201ENST00000330949 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.24■■□□□ 1.79
SOX1-201ENST00000330949 DLGAP2Q9P1A6 1054 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms