RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TULP4Q9NRJ4 1543 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 ARHGEF35A5YM69 484 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 TOM1L1O75674 476 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 XPO6Q96QU8 1125 aaKnown RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 PCDHA4Q9UN74 947 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 PCDH11YQ9BZA8 1340 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 TRIP12Q14669 1992 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 TJP3O95049 919 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 TMPRSS15P98073 1019 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 KAZNQ674X7 775 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 JADE1Q6IE81 842 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 RIBC1Q8N443 379 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 MMS19Q96T76 1030 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 TTC1Q99614 292 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 ARPP21Q9UBL0 812 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 DENND2AQ9ULE3 1009 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 ATP4AP20648 1035 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 KLHL38Q2WGJ6 581 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 TTBK2Q6IQ55 1244 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 WDR75Q8IWA0 830 aaKnown RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 KIF2BQ8N4N8 673 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 RIN2Q8WYP3 895 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 MS4A14Q96JA4 679 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 WNT8AQ9H1J5 351 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 RBM12Q9NTZ6 932 aaKnown RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 AP4S1Q9Y587 144 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 WDR91A4D1P6 747 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 LPXNO60711 386 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 ANXA13P27216 316 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 HSD17B3P37058 310 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 CYP2J2P51589 502 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 DDI1Q8WTU0 396 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 FUCA2Q9BTY2 467 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 SCN1AP35498 2009 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 FAM186AA6NE01 2351 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 ANKRD31Q8N7Z5 1873 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 KRT37O76014 449 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 TIMM10P62072 90 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 DMP1Q13316 513 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 REXO1L1PQ8IX06 675 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 THAP11Q96EK4 314 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 CHMP2BQ9UQN3 213 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 USP42Q9H9J4 1324 aaKnown RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 hCG_1642624A0A1W2PR95 340 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 DEAF1O75398 565 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 PRDM1O75626 825 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 CIAO1O76071 339 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 GHRP10912 638 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 FGFR4P22455 802 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 BPIFB4P59827 614 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 ZNF790Q6PG37 636 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 NELFCDQ8IXH7 590 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 PROCA1Q8NCQ7 364 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 PRPF31Q8WWY3 499 aaKnown RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 TRPV6Q9H1D0 765 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 MLXIPLQ9NP71 852 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 MAP3K19Q56UN5 1328 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 DICER1Q9UPY3 1922 aaKnown RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 CFAP69A5D8W1 941 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 CDH16O75309 829 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 RFX1P22670 979 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 TNFRSF8P28908 595 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 LIFRP42702 1097 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 PRCPP42785 496 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 DDX60Q8IY21 1712 aaKnown RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 NRXN1Q9ULB1 1477 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 RCAN1P53805 252 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 TSHZ1Q6ZSZ6 1077 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 PDIK1LQ8N165 341 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 ERP27Q96DN0 273 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 CEP19Q96LK0 163 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 POLR3CQ9BUI4 534 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 NRDE2Q9H7Z3 1164 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 BAG5Q9UL15 447 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 PFASO15067 1338 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 A0A1B0GUL6 1792 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 A0A1W2PQJ5 194 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 MAP2K7O14733 419 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 CAPN9O14815 690 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 TARSP26639 723 aaKnown RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 SERPINB1P30740 379 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 ADRM1Q16186 407 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 PHF23Q9BUL5 403 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-201ENST00000322213 OSBPL8Q9BZF1 889 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 ISCUQ9H1K1 167 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 DKK3Q9UBP4 350 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 PCDHA12Q9UN75 941 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 DOCK8Q8NF50 2099 aa7.53□□□□□ -1.2
SMC1A-201ENST00000322213 PYGBP11216 843 aa7.52□□□□□ -1.2
SMC1A-201ENST00000322213 NANOGNBQ7Z5D8 188 aa7.52□□□□□ -1.2
SMC1A-201ENST00000322213 MAGEB18Q96M61 343 aa7.52□□□□□ -1.2
SMC1A-201ENST00000322213 KLHL4Q9C0H6 718 aa7.52□□□□□ -1.2
SMC1A-201ENST00000322213 ARAP3Q8WWN8 1544 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 WDR46O15213 610 aaKnown RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 APOA1P02647 267 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 CCNE1P24864 410 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 TRPC1P48995 793 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 LRRC8BQ6P9F7 803 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 CCDC137Q6PK04 289 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms