RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZNF507Q8TCN5 953 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RAPGEF5Q92565 580 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MYCBPQ99417 103 aaPredicted RBP14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TRPV6Q9H1D0 765 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DHX36Q9H2U1 1008 aaKnown RBP14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ADGBQ8N7X0 1667 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 USP27XA6NNY8 438 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 COASYQ13057 564 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZNF667Q5HYK9 610 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 LMBRD2Q68DH5 695 aaPredicted RBP14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ARHGEF25Q86VW2 580 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 EXOC8Q8IYI6 725 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TTLL11Q8NHH1 800 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 OSBPL3Q9H4L5 887 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ATP6V0A4Q9HBG4 840 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RASA4BC9J798 803 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RASA4O43374 803 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 NR3C1P04150 777 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MDH1BQ5I0G3 518 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RAD54LQ92698 747 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RMDN3Q96TC7 470 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SLC13A1Q9BZW2 595 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZHX2Q9Y6X8 837 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CYP2E1P05181 493 aaPredicted RBP14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PDHA1P08559 390 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RXRBP28702 533 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 GPC3P51654 580 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PRELPP51888 382 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SEPT2Q15019 361 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 NECTIN1Q15223 517 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SLC13A4Q9UKG4 626 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CLDN3O15551 220 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZC3H18Q86VM9 953 aaKnown RBP14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SRRM1Q8IYB3 904 aaKnown RBP14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TTC25Q96NG3 672 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CNOT10Q9H9A5 744 aaKnown RBP14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SCOCQ9UIL1 159 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ERBB4Q15303 1308 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 IGSF1Q8N6C5 1336 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SNX2O60749 519 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MXD4Q14582 209 aaPredicted RBP14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SNRNP48Q6IEG0 339 aaKnown RBP14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PDIK1LQ8N165 341 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CDHR1Q96JP9 859 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ALG13Q9NP73 1137 aaKnown RBP14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MAPK13O15264 365 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FOXN1O15353 648 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MMP10P09238 476 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ESRRGP62508 458 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CUL4AQ13619 759 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 GLE1Q53GS7 698 aaKnown RBP14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SWSAP1Q6NVH7 229 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 EFHD1Q9BUP0 239 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PNMA2Q9UL42 364 aa14.51□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZFYVE16Q7Z3T8 1539 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 UBE4BO95155 1302 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ANP32DO95626 131 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 KPNA2P52292 529 aaKnown RBP14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RBBP7Q16576 425 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 C6orf118Q5T5N4 469 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TWF2Q6IBS0 349 aaKnown RBP14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PADI6Q6TGC4 694 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 EPM2AIP1Q7L775 607 aaPredicted RBP14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SYT2Q8N9I0 419 aaPredicted RBP14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TMEM47Q9BQJ4 181 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 KLC2Q9H0B6 622 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ANGPTL2Q9UKU9 493 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SAMD9Q5K651 1589 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CHEK2O96017 543 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MYL1P05976 194 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 LRRC63Q05C16 580 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CCHCR1Q8TD31 782 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 STRBPQ96SI9 672 aaKnown RBP14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 BSDC1Q9NW68 430 aaPredicted RBP14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SETSIPP0DME0 302 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 KRT10P13645 584 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CDC27P30260 824 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 AP1ARQ63HQ0 302 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FBXW4P57775 412 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MAGOHP61326 146 aaKnown RBP14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TAF1BQ53T94 588 aaPredicted RBP14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CCNYL1Q8N7R7 359 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 LBHD1Q9BQE6 289 aaPredicted RBP14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 WRNIP1Q96S55 665 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 GGT7Q9UJ14 662 aa14.5□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ECE2O60344 883 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 LCP1P13796 627 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ALS2CLQ60I27 953 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TBC1D9BQ66K14 1250 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FAM160B2Q86V87 743 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ITM2BQ9Y287 266 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DENND3A2RUS2 1198 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 hCG_1984214I3L0E3 225 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ADCY2Q08462 1091 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZNF713Q8N859 430 aaPredicted RBP14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ARL8AQ96BM9 186 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CEP95Q96GE4 821 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 E2F6O75461 281 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms