RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 NPTXRO95502 500 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 HPXP02790 462 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 EPHX1P07099 455 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 ZGLP1P0C6A0 271 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 ITGB5P18084 799 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 SDSP20132 328 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 AK2P54819 239 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 NEXNQ0ZGT2 675 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 SEPT2Q15019 361 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 GLIPR1L2Q4G1C9 344 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 XRRA1Q6P2D8 792 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 GALNT18Q6P9A2 607 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 CRTC3Q6UUV7 619 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 CYP2R1Q6VVX0 501 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 EPM2AIP1Q7L775 607 aaPredicted RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 SRLQ86TD4 932 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 AHI1Q8N157 1196 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 NDUFAF2Q8N183 169 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 PARD3BQ8TEW8 1205 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 NELL1Q92832 810 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 KISS1RQ969F8 398 aaPredicted RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 RCC1LQ96I51 464 aaKnown RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 PPM1MQ96MI6 270 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 FMNL2Q96PY5 1086 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 NELL2Q99435 816 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 SLC38A3Q99624 504 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 DHRS4Q9BTZ2 278 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 OSBPL5Q9H0X9 879 aaPredicted RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 SLC6A17Q9H1V8 727 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 SH3GLB2Q9NR46 395 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 RASSF1Q9NS23 344 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 ABCF2Q9UG63 623 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 ODF2LQ9ULJ1 636 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 SYNPO2Q9UMS6 1093 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 SH3BP1Q9Y3L3 701 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 PCDHGB3Q9Y5G1 929 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 FRMPD2Q68DX3 1309 aaPredicted RBP5.37□□□□□ -1.55
CD44-202ENST00000278385 PLEKHH1Q9ULM0 1364 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 MYOM2P54296 1465 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 NRXN1Q9ULB1 1477 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 ASXL1Q8IXJ9 1541 aa5.37□□□□□ -1.55
CD44-202ENST00000278385 TRBV23OR9-2A0A075B6M9 112 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 FAM170AA1A519 330 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 LRRC10BA6NIK2 292 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 H0Y8X5 98 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 VAMP4O75379 141 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 RTP1P59025 263 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 WASHC5Q12768 1159 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 GTF2H3Q13889 308 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 NR0B2Q15466 257 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 PKN1Q16512 942 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 GJC2Q5T442 439 aaPredicted RBP5.36□□□□□ -1.55
CD44-202ENST00000278385 OLFML2BQ68BL8 750 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 LDHAL6AQ6ZMR3 332 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 OTOP3Q7RTS5 596 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 KRT28Q7Z3Y7 464 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 LRRC47Q8N1G4 583 aaKnown RBP5.36□□□□□ -1.55
CD44-202ENST00000278385 BVESQ8NE79 360 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.36□□□□□ -1.55
CD44-202ENST00000278385 POF1BQ8WVV4 589 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 RPGRQ92834 1020 aaKnown RBP5.36□□□□□ -1.55
CD44-202ENST00000278385 CLIP3Q96DZ5 547 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 MAP6Q96JE9 813 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 MYD88Q99836 296 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 EIF2AK1Q9BQI3 630 aaKnown RBP5.36□□□□□ -1.55
CD44-202ENST00000278385 KLHL25Q9H0H3 589 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 EPN3Q9H201 632 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 DDX20Q9UHI6 824 aaKnown RBP5.36□□□□□ -1.55
CD44-202ENST00000278385 ZBTB21Q9ULJ3 1066 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 ANKRD6Q9Y2G4 727 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 PNPLA6Q8IY17 1366 aa5.36□□□□□ -1.55
CD44-202ENST00000278385 AFF2P51816 1311 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 ITIH6Q6UXX5 1313 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 A0A1B0GVC2 190 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 A0A1W2PQ45 241 aaPredicted RBP5.35□□□□□ -1.55
CD44-202ENST00000278385 A0A1W2PQY0 241 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 IQCA1LA6NCM1 817 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 PABPN1LA6NDY0 278 aaKnown RBP5.35□□□□□ -1.55
CD44-202ENST00000278385 PAPLNO95428 1278 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 HNRNPCP07910 306 aaKnown RBP eCLIP5.35□□□□□ -1.55
CD44-202ENST00000278385 POU3F2P20265 443 aaPredicted RBP5.35□□□□□ -1.55
CD44-202ENST00000278385 LPOP22079 712 aaPredicted RBP5.35□□□□□ -1.55
CD44-202ENST00000278385 L1CAMP32004 1257 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 CYP2C19P33261 490 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 ALDH5A1P51649 535 aaPredicted RBP5.35□□□□□ -1.55
CD44-202ENST00000278385 RBM6P78332 1123 aaKnown RBP5.35□□□□□ -1.55
CD44-202ENST00000278385 APBA1Q02410 837 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 ADCY1Q08828 1119 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 GRB10Q13322 594 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 PTPN21Q16825 1174 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 DPY19L1Q2PZI1 675 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 ARHGAP29Q52LW3 1261 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 FOXB2Q5VYV0 432 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 EEF1DP3Q658K8 133 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 LMNTD2Q8IXW0 634 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 NAXEQ8NCW5 288 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 ZNF496Q96IT1 587 aaPredicted RBP5.35□□□□□ -1.55
CD44-202ENST00000278385 EXOC2Q96KP1 924 aa5.35□□□□□ -1.55
CD44-202ENST00000278385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.35□□□□□ -1.55
CD44-202ENST00000278385 KIAA1586Q9HCI6 787 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms