RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 MYCBPAPQ8TBZ2 947 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 RAPGEF5Q92565 580 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 CDHR1Q96JP9 859 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 RIOK1Q9BRS2 568 aaKnown RBP11.71□□□□□ -0.53
DCLK1-201ENST00000255448 PCDHA4Q9UN74 947 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 PLEKHG2Q9H7P9 1386 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 GFPT2O94808 682 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 ZCCHC18P0CG32 403 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 STX1BP61266 288 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 TFDP1Q14186 410 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 FAM182BQ5T319 152 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 WDR11Q9BZH6 1224 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 APOBEC2Q9Y235 224 aaKnown RBP11.71□□□□□ -0.54
DCLK1-201ENST00000255448 FAM200BP0CF97 657 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 GARSP41250 739 aaKnown RBP11.71□□□□□ -0.54
DCLK1-201ENST00000255448 DMPKQ09013 629 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 MYLK4Q86YV6 388 aaPredicted RBP11.71□□□□□ -0.54
DCLK1-201ENST00000255448 NAF1Q96HR8 494 aaKnown RBP11.71□□□□□ -0.54
DCLK1-201ENST00000255448 DBNDD1Q9H9R9 158 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 AFF2P51816 1311 aa11.71□□□□□ -0.54
DCLK1-201ENST00000255448 RNF103-CHMP3A0A140T963 221 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 HSPA9P38646 679 aaKnown RBP11.7□□□□□ -0.54
DCLK1-201ENST00000255448 VHLP40337 213 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 POLGP54098 1239 aaPredicted RBP11.7□□□□□ -0.54
DCLK1-201ENST00000255448 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
DCLK1-201ENST00000255448 HDAC11Q96DB2 347 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 ERP27Q96DN0 273 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 CNGB3Q9NQW8 809 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 UBAP1Q9NZ09 502 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 TTLL3Q9Y4R7 772 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 PRAMEF22A3QJZ6 481 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 H7C1W4 665 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 MMP10P09238 476 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 CCNE1P24864 410 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 GFPT1Q06210 699 aaPredicted RBP11.7□□□□□ -0.54
DCLK1-201ENST00000255448 NR5A1Q13285 461 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 BBS9Q3SYG4 887 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 RARS2Q5T160 578 aaKnown RBP11.7□□□□□ -0.54
DCLK1-201ENST00000255448 SH3GL2Q99962 352 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 OLFML3Q9NRN5 406 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 FIS1Q9Y3D6 152 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 IQGAP3Q86VI3 1631 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 TTC26A0AVF1 554 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 CCDC90BQ9GZT6 254 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 SAYSD1Q9NPB0 183 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 OVOS2A0A0G2JMS6 1433 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 OVOS2A0A0J9YW53 1432 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 OVOS2Q6IE36 1432 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 BMP3P12645 472 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 MAPK4P31152 587 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 ZCWPW2Q504Y3 356 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 CIAPIN1Q6FI81 312 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 RCSD1Q6JBY9 416 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 EXOC8Q8IYI6 725 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 L1RE1Q9UN81 338 aa11.7□□□□□ -0.54
DCLK1-201ENST00000255448 CDHR2Q9BYE9 1310 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 USP17L3A6NCW0 530 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 USP17L4A6NCW7 530 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 ESRRBO95718 433 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 ACADSP16219 412 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 CASP1P29466 404 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 ABCD1P33897 745 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 HADHQ16836 314 aaKnown RBP11.69□□□□□ -0.54
DCLK1-201ENST00000255448 RESP18Q5W5W9 173 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 USP17L1Q7RTZ2 530 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 GJA10Q969M2 543 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 OPTNQ96CV9 577 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 AIFM3Q96NN9 605 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 SRPRBQ9Y5M8 271 aaKnown RBP11.69□□□□□ -0.54
DCLK1-201ENST00000255448 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 SYCE1LA8MT33 242 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 LGALS16A8MUM7 142 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 M0R2C6 588 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 NR2F2P24468 414 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 MAP4P27816 1152 aaKnown RBP11.69□□□□□ -0.54
DCLK1-201ENST00000255448 HOXA7P31268 230 aaPredicted RBP11.69□□□□□ -0.54
DCLK1-201ENST00000255448 SPOUT1Q5T280 376 aaKnown RBP11.69□□□□□ -0.54
DCLK1-201ENST00000255448 FOXP4Q8IVH2 680 aaPredicted RBP11.69□□□□□ -0.54
DCLK1-201ENST00000255448 PYROXD1Q8WU10 500 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 SEPT8Q92599 483 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 NDEL1Q9GZM8 345 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 GINM1Q9NU53 330 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 SNX12Q9UMY4 172 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 PCDHB6Q9Y5E3 794 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 SNX5Q9Y5X3 404 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 IQANK1A0A1B0GTG1 560 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 GRID2IPA4D2P6 1211 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 H7C0C1 242 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 XPOTO43592 962 aaKnown RBP11.69□□□□□ -0.54
DCLK1-201ENST00000255448 APOA1P02647 267 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 GAP43P17677 238 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 DDIT3P35638 169 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 ATP5OP48047 213 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 DYNLL1P63167 89 aaKnown RBP11.69□□□□□ -0.54
DCLK1-201ENST00000255448 MFN1Q8IWA4 741 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
DCLK1-201ENST00000255448 NARFQ9UHQ1 456 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 LRRN2O75325 713 aa11.69□□□□□ -0.54
DCLK1-201ENST00000255448 ATP6V1B1P15313 513 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms