RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ACCSQ96QU6 501 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 THSD7BQ9C0I4 1608 aa20.6■□□□□ 0.89
TNFSF9-201ENST00000245817 NKRFO15226 690 aaKnown RBP eCLIP20.6■□□□□ 0.89
TNFSF9-201ENST00000245817 EMC2Q15006 297 aa20.6■□□□□ 0.89
TNFSF9-201ENST00000245817 PTPN21Q16825 1174 aa20.6■□□□□ 0.89
TNFSF9-201ENST00000245817 HAUS6Q7Z4H7 955 aa20.6■□□□□ 0.89
TNFSF9-201ENST00000245817 EXOC8Q8IYI6 725 aa20.6■□□□□ 0.89
TNFSF9-201ENST00000245817 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
TNFSF9-201ENST00000245817 EMSYQ7Z589 1322 aa20.6■□□□□ 0.89
TNFSF9-201ENST00000245817 HOXC6P09630 235 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 MARK3P27448 753 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 HOXD13P35453 343 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 ARHGAP1Q07960 439 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 KCNA1Q09470 495 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 MAN2A1Q16706 1144 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 KATNBL1Q9H079 304 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 KMT5AQ9NQR1 393 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 PDLIM7Q9NR12 457 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 EXOC7Q9UPT5 735 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 PLXNA1Q9UIW2 1896 aa20.59■□□□□ 0.89
TNFSF9-201ENST00000245817 H0YCG3 227 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 SLC16A4O15374 487 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 NR3C1P04150 777 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 CYP2B6P20813 491 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 ABCD1P33897 745 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 RTP1P59025 263 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 TBC1D8BQ0IIM8 1120 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 PPTC7Q8NI37 304 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 ATP8B4Q8TF62 1192 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 CACTINQ8WUQ7 758 aaKnown RBP20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 SPIRE2Q8WWL2 714 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 EMID1Q96A84 441 aaPredicted RBP20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 KCNF1Q9H3M0 494 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 ST6GALNAC4Q9H4F1 302 aa20.58■□□□□ 0.89
TNFSF9-201ENST00000245817 PBX1P40424 430 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 NPTX2P47972 431 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 NCKAP1LP55160 1127 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 FCGRTP55899 365 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 DUSP28Q4G0W2 176 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 VWA3BQ502W6 1294 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 TMEM63BQ5T3F8 832 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 ITIH6Q6UXX5 1313 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 KSR1Q8IVT5 923 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 ZC3H3Q8IXZ2 948 aaKnown RBP20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 APBA2Q99767 749 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 STRA6Q9BX79 667 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 POLR3FQ9H1D9 316 aaPredicted RBP20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 DHX33Q9H6R0 707 aaKnown RBP20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 SAGE1Q9NXZ1 904 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 TRPC6Q9Y210 931 aa20.58■□□□□ 0.88
TNFSF9-201ENST00000245817 A0A1W2PQC6 194 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 CLIC2O15247 247 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 PPP1R37O75864 691 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 TBC1D8O95759 1140 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 EPB41P11171 864 aaKnown RBP20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 GTF2BQ00403 316 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 IRF5Q13568 498 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 TRIM14Q14142 442 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 NFIL3Q16649 462 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 TRIM50Q86XT4 487 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 HVCN1Q96D96 273 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 CFHR5Q9BXR6 569 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 NDST4Q9H3R1 872 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 XPNPEP1Q9NQW7 623 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 WBP1LQ9NX94 342 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 ERAP1Q9NZ08 941 aa20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 CGNQ9P2M7 1197 aaKnown RBP20.57■□□□□ 0.88
TNFSF9-201ENST00000245817 MCM3APO60318 1980 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 TGFB1I1O43294 461 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 HBP1O60381 514 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 SOX10P56693 466 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 TNFAIP2Q03169 654 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 LRMPQ12912 555 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 TBX2Q13207 712 aaPredicted RBP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 ARID5BQ14865 1188 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 PPP2R5AQ15172 486 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 TARBP2Q15633 366 aaKnown RBP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 GJC2Q5T442 439 aaPredicted RBP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 CEP135Q66GS9 1140 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 OLFML2BQ68BL8 750 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 OR6J1Q8NGC5 347 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 AFG1LQ8WV93 481 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 USP6NLQ92738 828 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 PCMTD1Q96MG8 357 aaPredicted RBP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 JPH2Q9BR39 696 aaPredicted RBP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 NTPCRQ9BSD7 190 aaKnown RBP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 METTL14Q9HCE5 456 aaKnown RBP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 ZNF236Q9UL36 1845 aa20.56■□□□□ 0.88
TNFSF9-201ENST00000245817 SLC16A3O15427 465 aaKnown RBP20.55■□□□□ 0.88
TNFSF9-201ENST00000245817 PPFIA4O75335 1185 aa20.55■□□□□ 0.88
TNFSF9-201ENST00000245817 SMPD1P17405 629 aa20.55■□□□□ 0.88
TNFSF9-201ENST00000245817 MARSP56192 900 aaKnown RBP20.55■□□□□ 0.88
TNFSF9-201ENST00000245817 SNRPFP62306 86 aaKnown RBP20.55■□□□□ 0.88
TNFSF9-201ENST00000245817 PLCB4Q15147 1175 aa20.55■□□□□ 0.88
TNFSF9-201ENST00000245817 MIIPQ5JXC2 388 aa20.55■□□□□ 0.88
TNFSF9-201ENST00000245817 ARMCX5Q6P1M9 558 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms