RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 STX17P56962 302 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 ALCAMQ13740 583 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 UGCGQ16739 394 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 TCERG1LQ5VWI1 586 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 SFR1Q86XK3 245 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 TNS4Q8IZW8 715 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 TRIML1Q8N9V2 468 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 PPP1R13LQ8WUF5 828 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 TRIM9Q9C026 710 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 ZBTB39O15060 712 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 PTMAP06454 111 aaKnown RBP12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 ZNF165P49910 485 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 FAM114A1Q8IWE2 563 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 RNF169Q8NCN4 708 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 EMID1Q96A84 441 aaPredicted RBP12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 ACCSQ96QU6 501 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 MAFBQ9Y5Q3 323 aaPredicted RBP12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 NPHP3-ACAD11A0A0J9YXS1 232 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 SLC16A4O15374 487 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 SPATA31C1P0DKV0 1188 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 CASP1P29466 404 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 NLRP11P59045 1033 aaKnown RBP12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 TYRO3Q06418 890 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 LBHD1Q9BQE6 289 aaPredicted RBP12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 REEP2Q9BRK0 252 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 RNPEPQ9H4A4 650 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 FRMD4BQ9Y2L6 1034 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 MYMKA6NI61 221 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 LYPLA2O95372 231 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 SERPINC1P01008 464 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 SFPQP23246 707 aaKnown RBP eCLIP12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 TMEM119Q4V9L6 283 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 HTATIP2Q9BUP3 242 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 TMEM206Q9H813 350 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 TMEM39AQ9NV64 488 aa12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 GNEQ9Y223 722 aaKnown RBP12.26□□□□□ -0.45
TNFAIP3-201ENST00000237289 PTGS1P23219 599 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 EFNA5P52803 228 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 GOLGA5Q8TBA6 731 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 C7orf25Q9BPX7 421 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 RUSC1Q9BVN2 902 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 DNM1LO00429 736 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 COASYQ13057 564 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 TMEM63BQ5T3F8 832 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 CEP135Q66GS9 1140 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 AFAP1L1Q8TED9 768 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 DNAJB3Q8WWF6 145 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 SEZ6LQ9BYH1 1024 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 DENND3A2RUS2 1198 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 PLS3P13797 630 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 MTIF2P46199 727 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 NLRP12P59046 1061 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 TRPV1Q8NER1 839 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 PRPF31Q8WWY3 499 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 DNAJC25Q9H1X3 360 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 C17orf75Q9HAS0 396 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 ANKFY1Q9P2R3 1169 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 CETN3O15182 167 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 EXOC3O60645 756 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 PURAQ00577 322 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 PAK1Q13153 545 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 ANO6Q4KMQ2 910 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 ANO5Q75V66 913 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 TMEM63CQ9P1W3 806 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 CTNND2Q9UQB3 1225 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 HPSEQ9Y251 543 aa12.25□□□□□ -0.45
TNFAIP3-201ENST00000237289 TPM1P09493 284 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 POMGNT1Q8WZA1 660 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 MMTAG2Q9BU76 263 aaKnown RBP12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 C11orf49Q9H6J7 331 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 GPRC5CQ9NQ84 441 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 ACTN4O43707 911 aaKnown RBP12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 LGR5O75473 907 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 VTNP04004 478 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 RAG1P15918 1043 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 CETN1Q12798 172 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 ARMCX5Q6P1M9 558 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 HAUS6Q7Z4H7 955 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 NRDCO43847 1150 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 RPS6KA5O75582 802 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 ZNF658Q5TYW1 1059 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 ZNF710Q8N1W2 664 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 FNBP1Q96RU3 617 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 LRFN2Q9ULH4 789 aa12.24□□□□□ -0.45
TNFAIP3-201ENST00000237289 ZNF862O60290 1169 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 PRPF6O94906 941 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 ATG7O95352 703 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 SPIRE1Q08AE8 756 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 KIZQ2M2Z5 673 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 TWF2Q6IBS0 349 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 MTHFD1LQ6UB35 978 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 KCNK18Q7Z418 384 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 PAWRQ96IZ0 340 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 KBTBD4Q9NVX7 518 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 COL1A2P08123 1366 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 GUCY2CP25092 1073 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 YARSP54577 528 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 NELFBQ8WX92 580 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 PPP1R12CQ9BZL4 782 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms