RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 C12orf60Q5U649 245 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 COL23A1Q86Y22 540 aaPredicted RBP11.18□□□□□ -0.62
FOXN1-201ENST00000226247 CLEC10AQ8IUN9 316 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 GLYCTKQ8IVS8 523 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 TRIM59Q8IWR1 403 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 TRIM4Q9C037 500 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 KCNK9Q9NPC2 374 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.18□□□□□ -0.62
FOXN1-201ENST00000226247 AMFRQ9UKV5 643 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 PPP1R9AQ9ULJ8 1098 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 GOLGA6L10A0A0M3HER8 536 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
FOXN1-201ENST00000226247 IGF2BP3O00425 579 aaKnown RBP eCLIP11.18□□□□□ -0.62
FOXN1-201ENST00000226247 FLOT1O75955 427 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 PAPOLAP51003 745 aaKnown RBP11.18□□□□□ -0.62
FOXN1-201ENST00000226247 PMS2P54278 862 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 TRAF1Q13077 416 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 UBE4AQ14139 1066 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 LRRC57Q8N9N7 239 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 C1orf131Q8NDD1 294 aaKnown RBP11.18□□□□□ -0.62
FOXN1-201ENST00000226247 RBM46Q8TBY0 533 aaKnown RBP11.18□□□□□ -0.62
FOXN1-201ENST00000226247 DNAJC17Q9NVM6 304 aaKnown RBP11.18□□□□□ -0.62
FOXN1-201ENST00000226247 AIPL1Q9NZN9 384 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 ARMCX3Q9UH62 379 aaPredicted RBP11.18□□□□□ -0.62
FOXN1-201ENST00000226247 PCDHA12Q9UN75 941 aa11.18□□□□□ -0.62
FOXN1-201ENST00000226247 COL14A1Q05707 1796 aaKnown RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 MYH1P12882 1939 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 POTECB2RU33 542 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 MMP10P09238 476 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 ALDH5A1P51649 535 aaPredicted RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 GALCP54803 685 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 LACTB2Q53H82 288 aaPredicted RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 ARMC9Q7Z3E5 817 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 HOOK3Q86VS8 718 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 SYCP3Q8IZU3 236 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 DAGLBQ8NCG7 672 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 GDAP1Q8TB36 358 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 SCFD1Q8WVM8 642 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 SYN2Q92777 582 aaPredicted RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 DNAJC19Q96DA6 116 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 BORCS6Q96GS4 357 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 BCAS3Q9H6U6 928 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 ERVK-5Q9HDB9 667 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 FAM114A2Q9NRY5 505 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 DUOX1Q9NRD9 1551 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 ZNF804BA4D1E1 1349 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 ABCA3Q99758 1704 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 C5orf60A6NFR6 353 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 CCDC188H7C350 402 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 DNAJC8O75937 253 aaPredicted RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 STAT3P40763 770 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 CASP5P51878 434 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 SLC8A3P57103 927 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 VPS36Q86VN1 386 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 CCDC65Q8IXS2 484 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 LRRC47Q8N1G4 583 aaKnown RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 NEK9Q8TD19 979 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 TEKT4Q8WW24 435 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 GPR101Q96P66 508 aaPredicted RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 EYA3Q99504 573 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 IKZF4Q9H2S9 585 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 CNOT10Q9H9A5 744 aaKnown RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 FGFR1OP2Q9NVK5 253 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 AJAP1Q9UKB5 411 aaPredicted RBP11.17□□□□□ -0.62
FOXN1-201ENST00000226247 TIAM2Q8IVF5 1701 aa11.17□□□□□ -0.62
FOXN1-201ENST00000226247 LRRD1A4D1F6 860 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 DPPA5A6NC42 116 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 SFI1A8K8P3 1242 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 SPIRE2Q8WWL2 714 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 ZNF317Q96PQ6 595 aaPredicted RBP11.16□□□□□ -0.62
FOXN1-201ENST00000226247 MTMR9Q96QG7 549 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 GANQ9H2C0 597 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 ECT2Q9H8V3 914 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 STK32BQ9NY57 414 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 XRCC5P13010 732 aaKnown RBP11.16□□□□□ -0.62
FOXN1-201ENST00000226247 PLCG2P16885 1265 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 ATP4AP20648 1035 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 ZC3H12AQ5D1E8 599 aaKnown RBP11.16□□□□□ -0.62
FOXN1-201ENST00000226247 NUGGCQ68CJ6 796 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 NT5DC3Q86UY8 548 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 SLC35G2Q8TBE7 412 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 C18orf8Q96DM3 657 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 CCDC169A6NNP5 214 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 TCP11X1B4DZS4 312 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 SMNDC1O75940 238 aaKnown RBP eCLIP11.16□□□□□ -0.62
FOXN1-201ENST00000226247 NTSR2O95665 410 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 LINGO3P0C6S8 592 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 PLA2G4BP0C869 781 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 CREB1P16220 341 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 PON1P27169 355 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 CASP4P49662 377 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 TUBP50607 506 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 ZCWPW2Q504Y3 356 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 ANKRD20A2Q5SQ80 823 aa11.16□□□□□ -0.62
FOXN1-201ENST00000226247 ANKRD20A1Q5TYW2 823 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms