RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TCHPQ9BT92 498 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 KCTD10Q9H3F6 313 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 TRAF3IP3Q9Y228 551 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 DOCK2Q92608 1830 aa16.21■□□□□ 0.18
UBE2D4-201ENST00000222402 PLCH1Q4KWH8 1693 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 ASNSP08243 561 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 COG2Q14746 738 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 ARL8AQ96BM9 186 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 DNAJC18Q9H819 358 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 RAVER2Q9HCJ3 691 aaKnown RBP16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 GJA3Q9Y6H8 435 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 EMSYQ7Z589 1322 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 CCDC88AQ3V6T2 1871 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 DAPK3O43293 454 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 CUL1Q13616 776 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 HGSNATQ68CP4 663 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 SRLQ86TD4 932 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 POMGNT1Q8WZA1 660 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 IDI2Q9BXS1 227 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 PLCB1Q9NQ66 1216 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 IRS2Q9Y4H2 1338 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 DDX60Q8IY21 1712 aaKnown RBP16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 SLC16A4O15374 487 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 IRX5P78411 483 aaPredicted RBP16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 ZCWPW2Q504Y3 356 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 INTS8Q75QN2 995 aaKnown RBP16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 RUBCNQ92622 972 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 CCDC114Q96M63 670 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 COL4A1P02462 1669 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 STRCQ7RTU9 1775 aa16.2■□□□□ 0.18
UBE2D4-201ENST00000222402 NOL4O94818 638 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 SYF2O95926 243 aaKnown RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 ARP10275 920 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 MEI1Q5TIA1 1274 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 LRRC31Q6UY01 552 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 CCDC121Q6ZUS5 278 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 METTL13Q8N6R0 699 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 ETNPPLQ8TBG4 499 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 RFFLQ8WZ73 363 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 SLC35C1Q96A29 364 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 FAM212AQ96EL1 285 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 IFT74Q96LB3 600 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 PURBQ96QR8 312 aaKnown RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 PTPN22Q9Y2R2 807 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 PLIN4Q96Q06 1357 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 SPATA31C1P0DKV0 1188 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 MAP2K1Q02750 393 aaPredicted RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 DMP1Q13316 513 aaPredicted RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 DHX37Q8IY37 1157 aaKnown RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 SLC35G2Q8TBE7 412 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 AENQ8WTP8 325 aaKnown RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 STK33Q9BYT3 514 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 TMEM39BQ9GZU3 492 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 IKZF4Q9H2S9 585 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 FAM114A2Q9NRY5 505 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 ASIC3Q9UHC3 531 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 P4HBP07237 508 aaKnown RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 RDXP35241 583 aaKnown RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 IRAK1P51617 712 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 MTMR1Q13613 665 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 WDR44Q5JSH3 913 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 HYIQ5T013 277 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 DENND2CQ68D51 928 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 XXYLT1Q8NBI6 393 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 CASKIN2Q8WXE0 1202 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 APEX2Q9UBZ4 518 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 CYP3A7-CYP3A51PA0A087WV96 503 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 HNRNPDLO14979 420 aaKnown RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 TNNI1P19237 187 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 CYP3A7P24462 503 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 VAMP7P51809 220 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 FOXR1Q6PIV2 292 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 TPCN2Q8NHX9 752 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 ZNF653Q96CK0 615 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 AGBL1Q96MI9 1066 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 VCPKMTQ9H867 229 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 AGPAT3Q9NRZ7 376 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 TMOD4Q9NZQ9 345 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 FEM1BQ9UK73 627 aa16.19■□□□□ 0.18
UBE2D4-201ENST00000222402 FTLP02792 175 aaPredicted RBP16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 ITIH3Q06033 890 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 PPP2R5EQ16537 467 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 FMO2Q99518 471 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 ZNF70Q9UC06 446 aaPredicted RBP16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 NOVA2Q9UNW9 492 aaKnown RBP16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 MYH10P35580 1976 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 AHDC1Q5TGY3 1603 aaPredicted RBP16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 TTI1O43156 1089 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 AARSP49588 968 aaKnown RBP eCLIP16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 PDE6CP51160 858 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 MNAT1P51948 309 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 DR1Q01658 176 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 BFSP1Q12934 665 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 HOOK3Q86VS8 718 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 TSEN2Q8NCE0 465 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms