RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 LARSQ9P2J5 1176 aaKnown RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 ZNF70Q9UC06 446 aaPredicted RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 MEIS1O00470 390 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 IRX1P78414 480 aaPredicted RBP12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 COG7P83436 770 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 PFKFB3Q16875 520 aaPredicted RBP12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 WDR44Q5JSH3 913 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 PDXDC1Q6P996 788 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 FAM186BQ8IYM0 893 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 PIGSQ96S52 555 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 DONSONQ9NYP3 566 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 HARSP12081 509 aaKnown RBP12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 CLEC10AQ8IUN9 316 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 GRK7Q8WTQ7 553 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 SREK1Q8WXA9 508 aaKnown RBP12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 TSNARE1Q96NA8 513 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 XPO6Q96QU8 1125 aaKnown RBP12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 SH3GL3Q99963 347 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 TRIM9Q9C026 710 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 NOD2Q9HC29 1040 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 VCX3AQ9NNX9 186 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 RGPD5Q99666 1765 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 PDHBP11177 359 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 BRAFP15056 766 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 CHN1P15882 459 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 KCNB1Q14721 858 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 ALX1Q15699 326 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 KAZNQ674X7 775 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 KDM7AQ6ZMT4 941 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 PALM2Q8IXS6 379 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 RUBCNQ92622 972 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 BATF3Q9NR55 127 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 ANAPC5Q9UJX4 755 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 MYCLP12524 364 aaPredicted RBP12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 SLC16A2P36021 539 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 KCNH2Q12809 1159 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 NFIAQ12857 509 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 PAF1Q8N7H5 531 aa12.42□□□□□ -0.42
DNMT3B-201ENST00000201963 PXDNLA1KZ92 1463 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 HSPA6P17066 643 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 HERVK_113P62684 666 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 SLFN13Q68D06 897 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 KCTD1Q719H9 257 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 ZNF653Q96CK0 615 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 TRIM51Q9BSJ1 452 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 AGXT2Q9BYV1 514 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 ZSCAN5CA6NGD5 496 aaPredicted RBP12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 ZBED4O75132 1171 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 PRPF6O94906 941 aaKnown RBP12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 KLRC1P26715 233 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 SATB1Q01826 763 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 TRAF1Q13077 416 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 BYSLQ13895 437 aaKnown RBP12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 CDKAL1Q5VV42 579 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 NAIF1Q69YI7 327 aaPredicted RBP12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 CDC42EP5Q6NZY7 148 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 PRMT1Q99873 361 aaKnown RBP12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 SPZ1Q9BXG8 430 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 VCPKMTQ9H867 229 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 EXOC1LA0A1B0GW35 172 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 CCT8L1PA6NM43 557 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 TCP11X1B4DZS4 312 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 MAPK13O15264 365 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 PSMC4P43686 418 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 PSMD2Q13200 908 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 FBXO33Q7Z6M2 555 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 GLT8D2Q9H1C3 349 aa12.41□□□□□ -0.42
DNMT3B-201ENST00000201963 SYF2O95926 243 aaKnown RBP12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 BMP6P22004 513 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 SNAP25P60880 206 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 SEPT6Q14141 434 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 CDC37Q16543 378 aaPredicted RBP12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 GUF1Q8N442 669 aaKnown RBP12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 CCDC89Q8N998 374 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 NUDCD1Q96RS6 583 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 CYTH2Q99418 400 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 IRAK4Q9NWZ3 460 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 PCDHAC2Q9Y5I4 1007 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 KIF3CO14782 793 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 PLA2G4BP0C869 781 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 ZKSCAN4Q969J2 545 aaPredicted RBP12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 NSUN4Q96CB9 384 aaKnown RBP12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 PPP1R9AQ9ULJ8 1098 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 ABCC6O95255 1503 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 HSD17B3P37058 310 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 AARSP49588 968 aaKnown RBP eCLIP12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 GPC2Q8N158 579 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 SRBD1Q8N5C6 995 aaKnown RBP12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 SLITRK6Q9H5Y7 841 aa12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 VIRMAQ69YN4 1812 aaKnown RBP12.4□□□□□ -0.42
DNMT3B-201ENST00000201963 BAZ2BQ9UIF8 2168 aaKnown RBP12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 YBX3P16989 372 aaKnown RBP eCLIP12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 FGFR4P22455 802 aa12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 HMGCS2P54868 508 aa12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 CRYMQ14894 314 aa12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 SH2D4BQ5SQS7 431 aa12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 NBPF12Q5TAG4 269 aaPredicted RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms