RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Rnf40Q3U319 1001 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 RragaQ80X95 313 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ddx10Q80Y44 875 aaKnown RBP6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 LppQ8BFW7 613 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Cyp4f39Q8BGU0 532 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Gpr180Q8BPS4 441 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Osbpl2Q8BX94 484 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Samd14Q8K070 417 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Arfgap2Q99K28 520 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Lpin2Q99PI5 893 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ccdc43Q9CR29 222 aaKnown RBP6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Akap8lQ9R0L7 642 aaKnown RBP6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Kif9Q9WV04 790 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 JcadQ5DTX6 1320 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Zswim8Q3UHH1 1832 aaKnown RBP6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Scn3aA2ASI5 1947 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Mnat1P51949 309 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 GalcP54818 684 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Erbb2P70424 1256 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tcf12Q61286 706 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 CbarpQ66L44 698 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Crtc1Q68ED7 630 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Churc1Q6DG52 112 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Rexo4Q6PAQ4 432 aaKnown RBP6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Fnbp1Q80TY0 616 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Dpp8Q80YA7 892 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tarsl2Q8BLY2 790 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Epha10Q8BYG9 1007 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Msantd4Q91YU3 345 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 PpanQ91YU8 470 aaKnown RBP6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Smc6Q924W5 1097 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Kremen1Q99N43 473 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Sytl1Q99N80 567 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Trap1Q9CQN1 706 aaKnown RBP6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Arl2bpQ9D385 163 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Klc4Q9DBS5 619 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Arpp21Q9DCB4 807 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Nup50Q9JIH2 466 aaKnown RBP6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Klrc1Q9Z202 244 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Scgb2b12S4R2L0 112 aa6.78□□□□□ -1.32
Lig4-202ENSMUST00000170033 Col5a2Q3U962 1497 aa6.77□□□□□ -1.32
Lig4-202ENSMUST00000170033 Magea4F2Z493 315 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Prl2c3P04768 224 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 EporP14753 507 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Foxp2P58463 714 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sem1P60897 70 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Znf280dQ68FE8 974 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Git1Q68FF6 770 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 KaznQ69ZS8 779 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Dnph1Q80VJ3 173 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cnot10Q8BH15 744 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rasgrp4Q8BTM9 673 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc4a7Q8BTY2 1034 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ythdf3Q8BYK6 585 aaKnown RBP6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 GanQ8CA72 597 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Depdc1aQ8CIG0 804 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ces4aQ8R0W5 563 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pex19Q8VCI5 299 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc5a5Q99PN0 618 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Mis18aQ9CZJ6 204 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ccdc130Q9D516 385 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Spock2Q9ER58 423 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cse1lQ9ERK4 971 aaKnown RBP6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Tjp2Q9Z0U1 1167 aaKnown RBP6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Mtcl1Q3UHU5 1945 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Col4a5Q63ZW6 1691 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Myo5aQ99104 1853 aaKnown RBP6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Mllt3A2AM29 569 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ttc38A3KMP2 465 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Apol6B7ZC55 329 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 A430078G23RikE9Q7Y4 484 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 IkbkbO88351 757 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Irf8P23611 424 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 RxrbP28704 520 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Hspa9P38647 679 aaKnown RBP6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Man1a2P39098 641 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pth1rP41593 591 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Lrrn4P59383 733 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Psmb7P70195 277 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cct5P80316 541 aaKnown RBP6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Klhdc9Q3USL1 350 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Fdxacb1Q3UY23 622 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Mdh1bQ5F204 500 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sh3gl1Q62419 368 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ankrd13dQ6PD24 605 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Q8BGC1 442 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ppfia2Q8BSS9 1257 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Arhgef19Q8BWA8 802 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc39a13Q8BZH0 361 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc9b1Q8C0X2 565 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ccdc28aQ8CEI3 192 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 PdxkQ8K183 312 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Arhgef25Q9CWR0 618 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Srfbp1Q9CZ91 441 aaKnown RBP6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 RnmtQ9D0L8 465 aaKnown RBP6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cep72Q9D3R3 646 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sertad2Q9JJG5 309 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cntn6Q9JMB8 1028 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ddx25Q9QY15 484 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Mta2Q9R190 668 aa6.77□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 59.6 ms