RNA–Protein interactions for RNA: ENSMUST00000112577.7

Pkp4-203, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,222 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-203ENSMUST00000112577 Setdb2Q8C267 713 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Pls3Q99K51 630 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tlr3Q99MB1 905 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Gm8994E9PV04 411 aaKnown RBP9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Scgb2b19J3QM75 112 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 CopeO89079 308 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tmod1P49813 359 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Psmc6P62334 389 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 BC051142Q3V0M8 400 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Mpp4Q6P7F1 635 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Raver2Q7TPD6 673 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Slc4a7Q8BTY2 1034 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Hspbp1Q99P31 357 aaKnown RBP9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Cnot8Q9D8X5 292 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tfr2Q9JKX3 798 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Gkap1Q9JMB0 366 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Gm1661E9Q963 441 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Kcnma1Q08460 1209 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 MlxipQ2VPU4 917 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Klhdc9Q3USL1 350 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Prm3Q62100 101 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Sin3bQ62141 1098 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Wdr44Q6NVE8 915 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Ankrd24Q80VM7 985 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Phf20l1Q8CCJ9 1013 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Lsm14bQ8CGC4 385 aaKnown RBP9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Gprc5cQ8K3J9 440 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Pcdhb2Q91Y00 799 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Adam22Q9R1V6 904 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Capn2O08529 700 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 P01734 135 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Ctnnd1P30999 938 aaKnown RBP9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 ItgadQ3V0T4 1168 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Gm10392Q3V3I3 114 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Nacc1Q7TSZ8 514 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Ipo5Q8BKC5 1097 aaKnown RBP9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Igdcc3Q8BQC3 813 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Fsd1lQ8BYN5 507 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Cfap36Q8C6E0 343 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Calhm6Q8C9E8 313 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Olfr390Q8VEZ7 311 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Nmrk1Q91W63 195 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tom1l1Q923U0 474 aa9.36□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Abca15E9PWH4 1668 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Ttc13A0A1L1SSC7 844 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 ArP19091 899 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Bace1P56818 501 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Rps6P62754 249 aaKnown RBP9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 YdjcQ14BV6 310 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tatdn3Q3U1C6 294 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tcf12Q61286 706 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Krt12Q64291 487 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Atp6v0d2Q80SY3 350 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 RimklbQ80WS1 387 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Fam204aQ8C6C7 236 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Znf467Q8JZL0 594 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Scrn2Q8VCA8 425 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Cog1Q9Z160 980 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Nwd2Q6P5U7 1742 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Zfp142G5E869 1843 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Ppfia4B8QI36 1187 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Agbl1Q09M05 972 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Oog4Q4G0C7 502 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Birc2Q62210 612 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Ahcyl2Q68FL4 613 aaKnown RBP9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Daam2Q80U19 1115 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Q80ZQ3 298 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Ireb2Q811J3 963 aaKnown RBP9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Calcoco1Q8CGU1 691 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 DnerQ8JZM4 737 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tor1aip1Q921T2 595 aaKnown RBP9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Mxra7Q9CZH7 178 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Prl2c5Q9JLV9 222 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tnfrsf10bQ9QZM4 381 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Cacna2d3Q9Z1L5 1091 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tnks1bp1P58871 1720 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Gm45208A0A140LJ36 292 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Slc35g2D3YVE8 412 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Usp17ldG5E8G2 545 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Usp17lcG5E8I7 545 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Gsta4P24472 222 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 SnrpfP62307 86 aaKnown RBP9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Gja5Q01231 358 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Zscan2Q07230 614 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Vps41Q5KU39 853 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Zfp91Q62511 572 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 AmphQ7TQF7 686 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Dars2Q8BIP0 653 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Lonp1Q8CGK3 949 aaKnown RBP9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Cplx3Q8R1B5 158 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Anapc4Q91W96 807 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Spdl1Q923A2 608 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Txnrd3Q99MD6 652 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Krt20Q9D312 431 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Xab2Q9DCD2 855 aaKnown RBP9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Uchl3Q9JKB1 230 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Tjp3Q9QXY1 905 aa9.35□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Mmrn1B2RPV6 1210 aa9.34□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Meis2P97367 477 aa9.34□□□□□ -0.91
Pkp4-203ENSMUST00000112577 Lrrc1Q80VQ1 524 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms