RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Q9DAQ4 598 aa17.83■□□□□ 0.44
Shh-201ENSMUST00000002708 Scgb2b7D3YYY1 112 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 FechP22315 420 aaKnown RBP17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 YdjcQ14BV6 310 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Scarf1Q5ND28 820 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Atp13a3Q5XF89 1219 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 EsrrbQ61539 433 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Ccdc25Q78PG9 208 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Efcab14Q8BGQ6 484 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Ccdc113Q8C5T8 377 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Bud13Q8R149 637 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Q922C1 641 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Psma8Q9CWH6 250 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Scn3aA2ASI5 1947 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Psme4Q5SSW2 1843 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Parp2O88554 559 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Dnm1lQ8K1M6 742 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Col23a1Q8K4G2 532 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Gpihbp1Q9D1N2 228 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Ubiad1Q9DC60 336 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Eya4Q9Z191 616 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Slfn14V9GXG1 899 aa17.82■□□□□ 0.44
Shh-201ENSMUST00000002708 Klhdc7aA2APT9 773 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Epha7Q61772 998 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Phf20Q8BLG0 1010 aaKnown RBP17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 MlxiplQ99MZ3 864 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Col2a1P28481 1487 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Frmpd3A0A140LIW3 1774 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 SynrgQ5SV85 1306 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Clrn2B2RVW2 232 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Snip1Q8BIZ6 383 aaKnown RBP17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Gcfc2Q8BKT3 769 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Scfd2Q8BTY8 684 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Zhx2Q8C0C0 836 aaKnown RBP17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Havcr2Q8VIM0 281 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Tdrd3Q91W18 743 aaKnown RBP17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 PlekQ9JHK5 350 aaKnown RBP17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 Myh11O08638 1972 aa17.81■□□□□ 0.44
Shh-201ENSMUST00000002708 DtnbO70585 659 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 H2afzP0C0S6 128 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 H2afvQ3THW5 128 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Fbxo10Q7TQF2 950 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 E330017A01RikQ8BU47 192 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 NagaQ9QWR8 415 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Gm45261A0A1B0GSP6 197 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Mms22lB1AUR6 1238 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Epha3P29319 983 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 FdxrQ61578 494 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Sin3bQ62141 1098 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 AarsQ8BGQ7 968 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 IarsQ8BU30 1262 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Appl2Q8K3G9 662 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 CrygnQ8VHL5 183 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 RpainQ9CWY9 219 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Cacna2d1O08532 1103 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Npr3P70180 536 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Tex35Q14BK3 207 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Erich4Q3UNU4 136 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 D630036H23RikQ3UQD6 204 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Prom2Q3UUY6 835 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Sfi1Q3UZY0 1216 aaKnown RBP17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Clul1Q3ZRW6 464 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Mcf2lQ64096 1149 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 PicalmQ7M6Y3 660 aaKnown RBP17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 AdalQ80SY6 360 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Aldh5a1Q8BWF0 523 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Tbc1d10cQ8C9V1 444 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Fam228aQ8CDW1 299 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Epn2Q8CHU3 595 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Slc25a38Q91XD8 326 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Tmem79Q9D709 391 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Slc5a4aQ9ET37 656 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Bcorl1A2AQH4 1781 aa17.8■□□□□ 0.44
Shh-201ENSMUST00000002708 Serpina1bP22599 413 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Rpl13P47963 211 aaKnown RBP17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Acot6Q32Q92 419 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Zfp957Q3UT76 567 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Phactr4Q501J7 694 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Klra5Q60652 266 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Acad11Q80XL6 779 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Fbxo28Q8BIG4 368 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Ttc16Q8C1F5 767 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Trappc3O55013 180 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Ercc5P35689 1170 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Gas7Q60780 421 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Churc1Q6DG52 112 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Fgd5Q80UZ0 1219 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 SucoQ8C341 1250 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Slf1Q8R3P9 1054 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 BbxQ8VBW5 907 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 4930449I24RikQ9D5E3 319 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Capn12Q9ER56 720 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Stk4Q9JI11 487 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Ddx20Q9JJY4 825 aaKnown RBP17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Fmnl1Q9JL26 1094 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 Tlr2Q9QUN7 784 aa17.79■□□□□ 0.44
Shh-201ENSMUST00000002708 ArP19091 899 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Gxylt1Q3UHH8 404 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 MaeaQ4VC33 396 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Kif5bQ61768 963 aa17.78■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms