RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	ARN2	P38724	620 aa		4.25	□□□□□ -1.73
RCL1	YOL010W	OAF1	P39720	1047 aa	Predicted RBP	4.25	□□□□□ -1.73
RCL1	YOL010W	URB2	P47108	1174 aa		4.25	□□□□□ -1.73
RCL1	YOL010W	UBX4	P54730	416 aa		4.25	□□□□□ -1.73
RCL1	YOL010W	MUS81	Q04149	632 aa	Predicted RBP	4.25	□□□□□ -1.73
RCL1	YOL010W	ESA1	Q08649	445 aa		4.25	□□□□□ -1.73
RCL1	YOL010W	YLR053C	Q12026	108 aa		4.25	□□□□□ -1.73
RCL1	YOL010W	NMD4	Q12129	218 aa		4.25	□□□□□ -1.73
RCL1	YOL010W	YPL247C	Q12523	523 aa		4.25	□□□□□ -1.73
RCL1	YOL010W	FOL3	Q12676	427 aa	Predicted RBP	4.25	□□□□□ -1.73
RCL1	YOL010W	SPO24	Q3E752	67 aa		4.25	□□□□□ -1.73
RCL1	YOL010W	MDM12	Q92328	271 aa		4.25	□□□□□ -1.73
RCL1	YOL010W	DET1	Q99288	334 aa	Known RBP	4.25	□□□□□ -1.73
RCL1	YOL010W	CAR1	P00812	333 aa	Known RBP	4.24	□□□□□ -1.73
RCL1	YOL010W	ILV2	P07342	687 aa	Known RBP	4.24	□□□□□ -1.73
RCL1	YOL010W	NMT1	P14743	455 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	ART10	P18634	518 aa	Known RBP	4.24	□□□□□ -1.73
RCL1	YOL010W	DBF2	P22204	572 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	ASF2	P32448	525 aa	Predicted RBP	4.24	□□□□□ -1.73
RCL1	YOL010W	EMP70	P32802	667 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	MRP8	P35719	219 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	SWH1	P35845	1188 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	APD1	P38281	316 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	PHO89	P38361	574 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	JEM1	P40358	645 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	FKH2	P41813	862 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	FAR3	P46671	204 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	ARC1	P46672	376 aa	Known RBP	4.24	□□□□□ -1.73
RCL1	YOL010W	PGU1	P47180	361 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	GTR2	P53290	341 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	BIO4	P53630	237 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	RCF2	P53721	224 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	YNL140C	P53910	189 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	REC102	Q02721	264 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	HRI1	Q05905	244 aa	Known RBP	4.24	□□□□□ -1.73
RCL1	YOL010W	YLR446W	Q06204	433 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	RIF2	Q06208	395 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	YEH1	Q07804	573 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	LOT6	Q07923	191 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	REX4	Q08237	289 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	RUP1	Q12242	671 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	YPR064W	Q12492	139 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	MHT1	Q12525	324 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	LSO2	Q3E772	92 aa	Known RBP	4.24	□□□□□ -1.73
RCL1	YOL010W	YOS9	Q99220	542 aa		4.24	□□□□□ -1.73
RCL1	YOL010W	STE7	P06784	515 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	SRV2	P17555	526 aa	Known RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	GPI12	P23797	304 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	SPB1	P25582	841 aa	Predicted RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	SSO1	P32867	290 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	MRPS5	P33759	307 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	SNU114	P36048	1008 aa	Known RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	CBP4	P37267	147 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	RIM2	P38127	377 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	YHL037C	P38733	133 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	LIN1	P38852	340 aa	Predicted RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	SOK1	P40317	901 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	YIL001W	P40560	513 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	GDS1	P41913	522 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	ALB1	P47019	175 aa	Predicted RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	BNA1	P47096	177 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	LIA1	P47120	325 aa	Known RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	PRP31	P49704	494 aa	Predicted RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	MIG2	P53035	382 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	NOP19	P53317	196 aa	Predicted RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	GOR1	P53839	350 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	SLM2	P53955	656 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	IRC15	Q02733	499 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	EFR3	Q03653	782 aa	Known RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	USA1	Q03714	838 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	PLM2	Q04383	521 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	RQC1	Q05468	723 aa	Known RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	STE23	Q06010	1027 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	SEI1	Q06058	285 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	PDR8	Q06149	701 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	YPL245W	Q12179	454 aa	Known RBP	4.23	□□□□□ -1.73
RCL1	YOL010W	TMA17	Q12513	150 aa		4.23	□□□□□ -1.73
RCL1	YOL010W	RPL15A	P05748	204 aa	Known RBP	4.22	□□□□□ -1.73
RCL1	YOL010W	HEM4	P06174	275 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	RPL20A	P0CX23	172 aa	Known RBP	4.22	□□□□□ -1.73
RCL1	YOL010W	RPL20B	P0CX24	172 aa	Predicted RBP	4.22	□□□□□ -1.73
RCL1	YOL010W	GAL3	P13045	520 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	CDC10	P25342	322 aa	Known RBP	4.22	□□□□□ -1.73
RCL1	YOL010W	OCA4	P25366	362 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	RPB9	P27999	122 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	YME2	P32843	850 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	PPQ1	P32945	549 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	AFR1	P33304	620 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	YKL102C	P34249	101 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	TPO5	P36029	618 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	AUR1	P36107	401 aa	Predicted RBP	4.22	□□□□□ -1.73
RCL1	YOL010W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
RCL1	YOL010W	SCS2	P40075	244 aa	Known RBP	4.22	□□□□□ -1.73
RCL1	YOL010W	PRE6	P40303	254 aa	Known RBP	4.22	□□□□□ -1.73
RCL1	YOL010W	COA1	P40452	197 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	SDP1	P40479	209 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	YPT32	P51996	222 aa	Known RBP	4.22	□□□□□ -1.73
RCL1	YOL010W	RPL15B	P54780	204 aa	Predicted RBP	4.22	□□□□□ -1.73
RCL1	YOL010W	YPL107W	Q02873	248 aa		4.22	□□□□□ -1.73
RCL1	YOL010W	YML131W	Q03102	365 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms