RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W INO2P26798 304 aa2.28□□□□□ -2.05
UBP15YMR304W VBA5P36172 582 aa2.28□□□□□ -2.05
UBP15YMR304W POP8P38208 133 aa2.28□□□□□ -2.05
UBP15YMR304W YHK8P38776 514 aa2.28□□□□□ -2.05
UBP15YMR304W KRE29P40026 464 aa2.28□□□□□ -2.05
UBP15YMR304W HIT1P46973 164 aa2.28□□□□□ -2.05
UBP15YMR304W EMC2P47133 292 aaKnown RBP2.28□□□□□ -2.05
UBP15YMR304W CLD1P53264 445 aa2.28□□□□□ -2.05
UBP15YMR304W NCE103P53615 221 aa2.28□□□□□ -2.05
UBP15YMR304W TMA20P89886 181 aaPredicted RBP2.28□□□□□ -2.05
UBP15YMR304W VHS1Q03785 461 aa2.28□□□□□ -2.05
UBP15YMR304W GTO3Q04806 366 aa2.28□□□□□ -2.05
UBP15YMR304W RAD34Q06665 692 aa2.28□□□□□ -2.05
UBP15YMR304W YPL272CQ08984 517 aa2.28□□□□□ -2.05
UBP15YMR304W AIM41Q12032 185 aa2.28□□□□□ -2.05
UBP15YMR304W SRO7Q12038 1033 aa2.28□□□□□ -2.05
UBP15YMR304W CDC28P00546 298 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W ALG7P07286 448 aa2.27□□□□□ -2.05
UBP15YMR304W MSI1P13712 422 aa2.27□□□□□ -2.05
UBP15YMR304W ARO3P14843 370 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W SNT1P25357 1226 aa2.27□□□□□ -2.05
UBP15YMR304W PEX3P28795 441 aa2.27□□□□□ -2.05
UBP15YMR304W PTP2P29461 750 aa2.27□□□□□ -2.05
UBP15YMR304W HMX1P32339 317 aa2.27□□□□□ -2.05
UBP15YMR304W AEP1P32493 518 aa2.27□□□□□ -2.05
UBP15YMR304W PTM1P32857 523 aa2.27□□□□□ -2.05
UBP15YMR304W RPT3P33298 428 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W ZRT3P34240 503 aa2.27□□□□□ -2.05
UBP15YMR304W KTR3P38130 404 aaPredicted RBP2.27□□□□□ -2.05
UBP15YMR304W WSS1P38838 269 aa2.27□□□□□ -2.05
UBP15YMR304W YER130CP39959 443 aa2.27□□□□□ -2.05
UBP15YMR304W HAT2P39984 401 aa2.27□□□□□ -2.05
UBP15YMR304W YIR035CP40579 254 aa2.27□□□□□ -2.05
UBP15YMR304W GPP1P41277 250 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W DIM1P41819 318 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W MNN5P46982 586 aa2.27□□□□□ -2.05
UBP15YMR304W YJL118WP47022 219 aa2.27□□□□□ -2.05
UBP15YMR304W YJR141WP47172 347 aaPredicted RBP2.27□□□□□ -2.05
UBP15YMR304W PHB2P50085 310 aa2.27□□□□□ -2.05
UBP15YMR304W MKC7P53379 596 aa2.27□□□□□ -2.05
UBP15YMR304W REG1Q00816 1014 aa2.27□□□□□ -2.05
UBP15YMR304W SNU56Q03782 492 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W MUS81Q04149 632 aaPredicted RBP2.27□□□□□ -2.05
UBP15YMR304W SHH3Q04487 196 aa2.27□□□□□ -2.05
UBP15YMR304W ROY1Q04847 553 aa2.27□□□□□ -2.05
UBP15YMR304W YLR287CQ05881 355 aa2.27□□□□□ -2.05
UBP15YMR304W TOR2P32600 2474 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W MET17P06106 444 aa2.27□□□□□ -2.05
UBP15YMR304W BCY1P07278 416 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W MET2P08465 486 aa2.27□□□□□ -2.05
UBP15YMR304W PUT1P09368 476 aa2.27□□□□□ -2.05
UBP15YMR304W AMD1P15274 810 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W DEG1P31115 442 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W SKG6P32900 734 aaPredicted RBP2.27□□□□□ -2.05
UBP15YMR304W DOA1P36037 715 aa2.27□□□□□ -2.05
UBP15YMR304W MOH1P38191 138 aa2.27□□□□□ -2.05
UBP15YMR304W MMS4P38257 691 aa2.27□□□□□ -2.05
UBP15YMR304W EXO5P38289 585 aa2.27□□□□□ -2.05
UBP15YMR304W WSC4P38739 605 aa2.27□□□□□ -2.05
UBP15YMR304W SHU2P38957 223 aa2.27□□□□□ -2.05
UBP15YMR304W LYS9P38999 446 aa2.27□□□□□ -2.05
UBP15YMR304W ARF3P40994 183 aaRIP-Chip data2.27□□□□□ -2.05not detected
UBP15YMR304W LSM1P47017 172 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W ASE1P50275 885 aa2.27□□□□□ -2.05
UBP15YMR304W OCA1P50946 238 aaPredicted RBP2.27□□□□□ -2.05
UBP15YMR304W YKR011CQ02209 353 aa2.27□□□□□ -2.05
UBP15YMR304W BSC6Q08280 497 aa2.27□□□□□ -2.05
UBP15YMR304W YDL177CQ12257 170 aa2.27□□□□□ -2.05
UBP15YMR304W EMP46Q12396 444 aa2.27□□□□□ -2.05
UBP15YMR304W SPO23P33757 523 aa2.27□□□□□ -2.05
UBP15YMR304W YBR241CP38142 488 aa2.27□□□□□ -2.05
UBP15YMR304W CDS1P38221 457 aa2.27□□□□□ -2.05
UBP15YMR304W FMP23P38231 175 aa2.27□□□□□ -2.05
UBP15YMR304W LAS21P40367 830 aa2.27□□□□□ -2.05
UBP15YMR304W INA22P40576 216 aa2.27□□□□□ -2.05
UBP15YMR304W PMT6P42934 759 aa2.27□□□□□ -2.05
UBP15YMR304W CCT7P42943 550 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W PET130P47065 347 aa2.27□□□□□ -2.05
UBP15YMR304W AMA1P50082 593 aa2.27□□□□□ -2.05
UBP15YMR304W PEX31P53203 462 aa2.27□□□□□ -2.05
UBP15YMR304W IMO32P53219 342 aa2.27□□□□□ -2.05
UBP15YMR304W IVY1Q04934 453 aa2.27□□□□□ -2.05
UBP15YMR304W VTA1Q06263 330 aa2.27□□□□□ -2.05
UBP15YMR304W TMA46Q12000 345 aaKnown RBP2.27□□□□□ -2.05
UBP15YMR304W DST1P07273 309 aa2.26□□□□□ -2.05
UBP15YMR304W TPM1P17536 199 aaKnown RBP2.26□□□□□ -2.05
UBP15YMR304W NPR1P22211 790 aa2.26□□□□□ -2.05
UBP15YMR304W COQ3P27680 312 aa2.26□□□□□ -2.05
UBP15YMR304W NAM9P27929 486 aa2.26□□□□□ -2.05
UBP15YMR304W GAC1P28006 793 aa2.26□□□□□ -2.05
UBP15YMR304W OCH1P31755 480 aa2.26□□□□□ -2.05
UBP15YMR304W ERP5P38819 212 aa2.26□□□□□ -2.05
UBP15YMR304W PRE6P40303 254 aaKnown RBP2.26□□□□□ -2.05
UBP15YMR304W FIS1P40515 155 aa2.26□□□□□ -2.05
UBP15YMR304W HXT9P40885 567 aa2.26□□□□□ -2.05
UBP15YMR304W SWP82P43554 623 aa2.26□□□□□ -2.05
UBP15YMR304W ALY2P47029 1046 aa2.26□□□□□ -2.05
UBP15YMR304W IKS1P47042 667 aa2.26□□□□□ -2.05
UBP15YMR304W VMA10P48836 114 aaKnown RBP2.26□□□□□ -2.05
UBP15YMR304W RCF2P53721 224 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms