RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C MIG1P27705 504 aa1.79□□□□□ -2.12
VPS20YMR077C TOS2P50078 622 aa1.79□□□□□ -2.12
VPS20YMR077C CDH1P53197 566 aa1.79□□□□□ -2.12
VPS20YMR077C MIX17Q03667 156 aa1.79□□□□□ -2.12
VPS20YMR077C ROY1Q04847 553 aa1.79□□□□□ -2.12
VPS20YMR077C MMR1Q06324 491 aa1.79□□□□□ -2.12
VPS20YMR077C YDL109CQ12103 647 aa1.79□□□□□ -2.12
VPS20YMR077C ISN1Q99312 450 aa1.79□□□□□ -2.12
VPS20YMR077C HPR1P17629 752 aaKnown RBP1.78□□□□□ -2.12
VPS20YMR077C CPT1P17898 393 aa1.78□□□□□ -2.12
VPS20YMR077C COX10P21592 462 aa1.78□□□□□ -2.12
VPS20YMR077C SEC27P41811 889 aaKnown RBP1.78□□□□□ -2.12
VPS20YMR077C SMD1Q02260 146 aaPredicted RBP1.78□□□□□ -2.12
VPS20YMR077C YRF1-4O13559 1382 aa1.77□□□□□ -2.13
VPS20YMR077C NAS6P50086 228 aa1.77□□□□□ -2.13
VPS20YMR077C CDD1Q06549 142 aa1.77□□□□□ -2.13
VPS20YMR077C NSE1Q07913 336 aa1.77□□□□□ -2.13
VPS20YMR077C RPL12AP0CX53 165 aaKnown RBP1.76□□□□□ -2.13
VPS20YMR077C RPL12BP0CX54 165 aa1.76□□□□□ -2.13
VPS20YMR077C TOA2P32774 122 aa1.76□□□□□ -2.13
VPS20YMR077C TIP20P33891 701 aa1.76□□□□□ -2.13
VPS20YMR077C YKR032WP36127 104 aa1.76□□□□□ -2.13
VPS20YMR077C ABM1P47146 123 aa1.76□□□□□ -2.13
VPS20YMR077C HSH155P49955 971 aaKnown RBP1.76□□□□□ -2.13
VPS20YMR077C YPL113CQ02961 396 aa1.76□□□□□ -2.13
VPS20YMR077C GAS2Q06135 555 aa1.76□□□□□ -2.13
VPS20YMR077C RLP24Q07915 199 aaKnown RBP1.76□□□□□ -2.13
VPS20YMR077C RNH203Q12338 110 aa1.76□□□□□ -2.13
VPS20YMR077C YMR262WP38430 313 aa1.75□□□□□ -2.13
VPS20YMR077C AIM23P47015 356 aa1.75□□□□□ -2.13
VPS20YMR077C YDR341CQ05506 607 aaKnown RBP1.75□□□□□ -2.13
VPS20YMR077C SFI1Q12369 946 aa1.75□□□□□ -2.13
VPS20YMR077C RPL23AP0CX41 137 aaKnown RBP1.74□□□□□ -2.13
VPS20YMR077C RPL23BP0CX42 137 aaKnown RBP1.74□□□□□ -2.13
VPS20YMR077C MIR1P23641 311 aaKnown RBP1.74□□□□□ -2.13
VPS20YMR077C SLM4P38247 162 aa1.74□□□□□ -2.13
VPS20YMR077C SHE4P51534 789 aa1.74□□□□□ -2.13
VPS20YMR077C TAF11Q04226 346 aa1.74□□□□□ -2.13
VPS20YMR077C RRI2Q12348 645 aa1.74□□□□□ -2.13
VPS20YMR077C PGA3Q12746 312 aaKnown RBP1.74□□□□□ -2.13
VPS20YMR077C AFI1Q99222 893 aa1.74□□□□□ -2.13
VPS20YMR077C RIM1P32445 135 aaKnown RBP1.73□□□□□ -2.13
VPS20YMR077C YBL081WP38180 368 aaKnown RBP1.73□□□□□ -2.13
VPS20YMR077C BUD13P46947 266 aaPredicted RBP1.73□□□□□ -2.13
VPS20YMR077C MNN5P46982 586 aa1.73□□□□□ -2.13
VPS20YMR077C AEP3Q12089 606 aa1.73□□□□□ -2.13
VPS20YMR077C OPI3P05375 206 aa1.72□□□□□ -2.13
VPS20YMR077C ZTA1P38230 334 aaKnown RBP1.72□□□□□ -2.13
VPS20YMR077C ROG1P53118 685 aa1.72□□□□□ -2.13
VPS20YMR077C ERO1Q03103 563 aa1.72□□□□□ -2.13
VPS20YMR077C VPS54Q12071 889 aa1.72□□□□□ -2.13
VPS20YMR077C PRP46Q12417 451 aaPredicted RBP1.72□□□□□ -2.13
VPS20YMR077C EFM1P38732 585 aa1.71□□□□□ -2.14
VPS20YMR077C PMT5P52867 743 aa1.71□□□□□ -2.14
VPS20YMR077C URC2Q04411 772 aa1.71□□□□□ -2.14
VPS20YMR077C PLB3Q08108 686 aa1.71□□□□□ -2.14
VPS20YMR077C CLP1Q08685 445 aaPredicted RBP1.71□□□□□ -2.14
VPS20YMR077C BGL2P15703 313 aaKnown RBP1.7□□□□□ -2.14
VPS20YMR077C BYE1P36106 594 aa1.7□□□□□ -2.14
VPS20YMR077C UTP15Q04305 513 aaKnown RBP1.7□□□□□ -2.14
VPS20YMR077C YPR063CQ12160 140 aa1.7□□□□□ -2.14
VPS20YMR077C MMT2Q08970 484 aa1.69□□□□□ -2.14
VPS20YMR077C PMT2P31382 759 aa1.68□□□□□ -2.14
VPS20YMR077C SSE1P32589 693 aaKnown RBP1.68□□□□□ -2.14
VPS20YMR077C NRP1P32770 719 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
VPS20YMR077C YKR015CP36111 568 aa1.68□□□□□ -2.14
VPS20YMR077C PAC11P40960 533 aa1.68□□□□□ -2.14
VPS20YMR077C GPD2P41911 440 aaKnown RBP1.68□□□□□ -2.14
VPS20YMR077C CSI1Q04368 295 aa1.68□□□□□ -2.14
VPS20YMR077C MET2P08465 486 aa1.67□□□□□ -2.14
VPS20YMR077C NFU1P32860 256 aa1.67□□□□□ -2.14
VPS20YMR077C QDR3P38227 689 aa1.67□□□□□ -2.14
VPS20YMR077C SMC2P38989 1170 aaKnown RBP1.67□□□□□ -2.14
VPS20YMR077C SER3P40054 469 aa1.67□□□□□ -2.14
VPS20YMR077C ASG7P46993 209 aa1.67□□□□□ -2.14
VPS20YMR077C EFM3P47163 339 aa1.67□□□□□ -2.14
VPS20YMR077C BNI5P53890 448 aaKnown RBP1.67□□□□□ -2.14
VPS20YMR077C YDR114CQ04597 100 aa1.67□□□□□ -2.14
VPS20YMR077C ARR1Q06596 294 aa1.67□□□□□ -2.14
VPS20YMR077C BAT2P47176 376 aaKnown RBP1.66□□□□□ -2.14
VPS20YMR077C YPL080CQ02826 108 aa1.66□□□□□ -2.14
VPS20YMR077C GTO3Q04806 366 aa1.66□□□□□ -2.14
VPS20YMR077C TDH2P00358 332 aaKnown RBP1.65□□□□□ -2.15
VPS20YMR077C TDH3P00359 332 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
VPS20YMR077C RNA1P11745 407 aaKnown RBP1.65□□□□□ -2.15
VPS20YMR077C DAL81P21657 970 aa1.65□□□□□ -2.15
VPS20YMR077C MRPL8P22353 238 aa1.65□□□□□ -2.15
VPS20YMR077C RRP7P25368 297 aaPredicted RBP1.65□□□□□ -2.15
VPS20YMR077C RSA4P25382 515 aaKnown RBP1.65□□□□□ -2.15
VPS20YMR077C DIB1Q06819 143 aaPredicted RBP1.65□□□□□ -2.15
VPS20YMR077C GAT3Q07928 141 aa1.65□□□□□ -2.15
VPS20YMR077C YDR018CQ12185 396 aa1.65□□□□□ -2.15
VPS20YMR077C PHO91P27514 894 aa1.64□□□□□ -2.15
VPS20YMR077C URA7P28274 579 aaKnown RBP1.64□□□□□ -2.15
VPS20YMR077C PEX30Q06169 523 aa1.64□□□□□ -2.15
VPS20YMR077C CTA1P15202 515 aa1.63□□□□□ -2.15
VPS20YMR077C RTT102P53330 157 aa1.63□□□□□ -2.15
VPS20YMR077C YLR456WQ06199 204 aa1.63□□□□□ -2.15
VPS20YMR077C TSR2Q06672 205 aaKnown RBP1.63□□□□□ -2.15
VPS20YMR077C INO2P26798 304 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms