RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C SMP1P38128 452 aa2.09□□□□□ -2.07
UBX4YMR067C SHE1P38200 338 aa2.09□□□□□ -2.07
UBX4YMR067C DCI1Q08558 271 aa2.09□□□□□ -2.07
UBX4YMR067C YDL109CQ12103 647 aa2.09□□□□□ -2.07
UBX4YMR067C ATP16Q12165 160 aa2.09□□□□□ -2.07
UBX4YMR067C ISA2Q12425 185 aa2.09□□□□□ -2.07
UBX4YMR067C CKA2P19454 339 aa2.08□□□□□ -2.08
UBX4YMR067C MRPL8P22353 238 aa2.08□□□□□ -2.08
UBX4YMR067C COS9P36034 407 aa2.08□□□□□ -2.08
UBX4YMR067C YBR241CP38142 488 aa2.08□□□□□ -2.08
UBX4YMR067C TRR2P38816 342 aa2.08□□□□□ -2.08
UBX4YMR067C HEM14P40012 539 aa2.08□□□□□ -2.08
UBX4YMR067C BIO3P50277 480 aa2.08□□□□□ -2.08
UBX4YMR067C RAD23P32628 398 aaKnown RBP2.07□□□□□ -2.08
UBX4YMR067C FRM2P37261 193 aa2.07□□□□□ -2.08
UBX4YMR067C RRT13P40042 185 aa2.07□□□□□ -2.08
UBX4YMR067C RPN14P53196 417 aa2.07□□□□□ -2.08
UBX4YMR067C YGR015CP53208 328 aa2.07□□□□□ -2.08
UBX4YMR067C ZRG17P53735 605 aa2.07□□□□□ -2.08
UBX4YMR067C SED5Q01590 340 aa2.07□□□□□ -2.08
UBX4YMR067C MRX8Q05473 314 aa2.07□□□□□ -2.08
UBX4YMR067C YOR376WQ08900 122 aa2.07□□□□□ -2.08
UBX4YMR067C FUS3P16892 353 aaKnown RBP2.06□□□□□ -2.08
UBX4YMR067C MIR1P23641 311 aaKnown RBP2.06□□□□□ -2.08
UBX4YMR067C PTK1P36002 662 aaPredicted RBP2.06□□□□□ -2.08
UBX4YMR067C YKR015CP36111 568 aa2.06□□□□□ -2.08
UBX4YMR067C BUD27P43573 796 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
UBX4YMR067C CTK3P46963 296 aaPredicted RBP2.06□□□□□ -2.08
UBX4YMR067C RMI1Q02685 241 aa2.06□□□□□ -2.08
UBX4YMR067C VTI1Q04338 217 aa2.06□□□□□ -2.08
UBX4YMR067C AST1P35183 429 aa2.05□□□□□ -2.08
UBX4YMR067C YJR054WP47114 497 aa2.05□□□□□ -2.08
UBX4YMR067C MRX11Q03079 207 aa2.05□□□□□ -2.08
UBX4YMR067C INP2Q03824 705 aa2.05□□□□□ -2.08
UBX4YMR067C SRN2Q99176 213 aa2.05□□□□□ -2.08
UBX4YMR067C AUS1Q08409 1394 aa2.05□□□□□ -2.08
UBX4YMR067C STE2D6VTK4 431 aa2.04□□□□□ -2.08
UBX4YMR067C RPL23AP0CX41 137 aaKnown RBP2.04□□□□□ -2.08
UBX4YMR067C RPL23BP0CX42 137 aaKnown RBP2.04□□□□□ -2.08
UBX4YMR067C SSE1P32589 693 aaKnown RBP2.04□□□□□ -2.08
UBX4YMR067C KAP104P38217 918 aaKnown RBP2.04□□□□□ -2.08
UBX4YMR067C UFE1P41834 346 aa2.04□□□□□ -2.08
UBX4YMR067C AIM23P47015 356 aa2.04□□□□□ -2.08
UBX4YMR067C SLT2Q00772 484 aa2.04□□□□□ -2.08
UBX4YMR067C SRB2P34162 210 aa2.03□□□□□ -2.08
UBX4YMR067C DBP7P36120 742 aaKnown RBP2.03□□□□□ -2.08
UBX4YMR067C RBG1P39729 369 aa2.03□□□□□ -2.08
UBX4YMR067C COS4P43542 379 aa2.03□□□□□ -2.08
UBX4YMR067C CDH1P53197 566 aa2.03□□□□□ -2.08
UBX4YMR067C IPK1Q06667 281 aa2.03□□□□□ -2.08
UBX4YMR067C GAT3Q07928 141 aa2.03□□□□□ -2.08
UBX4YMR067C GPM3Q12326 303 aa2.03□□□□□ -2.08
UBX4YMR067C YAL067W-AQ8TGK6 75 aa2.03□□□□□ -2.08
UBX4YMR067C EFM1P38732 585 aa2.02□□□□□ -2.09
UBX4YMR067C STB1P42845 420 aa2.02□□□□□ -2.09
UBX4YMR067C CIK1Q01649 594 aa2.02□□□□□ -2.09
UBX4YMR067C MEH1Q02205 184 aa2.02□□□□□ -2.09
UBX4YMR067C API2Q04413 109 aa2.02□□□□□ -2.09
UBX4YMR067C GAS2Q06135 555 aa2.02□□□□□ -2.09
UBX4YMR067C SHS1Q07657 551 aa2.02□□□□□ -2.09
UBX4YMR067C YPR096CO13587 100 aa2.01□□□□□ -2.09
UBX4YMR067C TIP20P33891 701 aa2.01□□□□□ -2.09
UBX4YMR067C MNL1P38888 796 aa2.01□□□□□ -2.09
UBX4YMR067C GGC1P38988 300 aa2.01□□□□□ -2.09
UBX4YMR067C EFM3P47163 339 aa2.01□□□□□ -2.09
UBX4YMR067C APC4Q04601 652 aa2.01□□□□□ -2.09
UBX4YMR067C FAR10Q06001 478 aa2.01□□□□□ -2.09
UBX4YMR067C YLH47Q06493 454 aa2.01□□□□□ -2.09
UBX4YMR067C PMT2P31382 759 aa2□□□□□ -2.09
UBX4YMR067C SKG6P32900 734 aaPredicted RBP2□□□□□ -2.09
UBX4YMR067C YJL144WP47009 104 aa2□□□□□ -2.09
UBX4YMR067C HRT1Q08273 121 aa2□□□□□ -2.09
UBX4YMR067C SPE3Q12074 293 aaKnown RBP2□□□□□ -2.09
UBX4YMR067C EFB1P32471 206 aaKnown RBP1.99□□□□□ -2.09
UBX4YMR067C VAM7P32912 316 aa1.99□□□□□ -2.09
UBX4YMR067C CBF5P33322 483 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
UBX4YMR067C PEX5P35056 612 aa1.99□□□□□ -2.09
UBX4YMR067C SRP72P38688 640 aaKnown RBP1.99□□□□□ -2.09
UBX4YMR067C YHR182WP38870 785 aa1.99□□□□□ -2.09
UBX4YMR067C MLH1P38920 769 aa1.99□□□□□ -2.09
UBX4YMR067C YIL059CP40520 121 aa1.99□□□□□ -2.09
UBX4YMR067C NAS6P50086 228 aa1.99□□□□□ -2.09
UBX4YMR067C PRM1P53835 661 aa1.99□□□□□ -2.09
UBX4YMR067C GMC1Q04399 608 aa1.99□□□□□ -2.09
UBX4YMR067C BGL2P15703 313 aaKnown RBP1.98□□□□□ -2.09
UBX4YMR067C SPP381P38282 291 aaPredicted RBP1.98□□□□□ -2.09
UBX4YMR067C YHR177WP38867 453 aa1.98□□□□□ -2.09
UBX4YMR067C LYS12P40495 371 aaKnown RBP1.98□□□□□ -2.09
UBX4YMR067C MOB2P43563 287 aa1.98□□□□□ -2.09
UBX4YMR067C YOL029CQ08187 201 aa1.98□□□□□ -2.09
UBX4YMR067C MMT2Q08970 484 aa1.98□□□□□ -2.09
UBX4YMR067C RPN5Q12250 445 aaKnown RBP1.98□□□□□ -2.09
UBX4YMR067C YOR338WQ99326 363 aa1.98□□□□□ -2.09
UBX4YMR067C UBA3Q99344 299 aa1.98□□□□□ -2.09
UBX4YMR067C RPL1AP0CX43 217 aaKnown RBP1.97□□□□□ -2.09
UBX4YMR067C RPL1BP0CX44 217 aaKnown RBP1.97□□□□□ -2.09
UBX4YMR067C BDH1P39714 382 aa1.97□□□□□ -2.09
UBX4YMR067C RET3P53600 189 aa1.97□□□□□ -2.09
UBX4YMR067C SUR7P54003 302 aa1.97□□□□□ -2.09
UBX4YMR067C VPS9P54787 451 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms