RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C YSR3P23501 404 aa10.36□□□□□ -0.75
SPT8YLR055C MSS1P32559 526 aaPredicted RBP10.36□□□□□ -0.75
SPT8YLR055C GRE3P38715 327 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75not detected
SPT8YLR055C BIG1P38813 335 aa10.36□□□□□ -0.75
SPT8YLR055C RNH202Q05635 350 aa10.36□□□□□ -0.75
SPT8YLR055C YLR224WQ05947 369 aa10.36□□□□□ -0.75
SPT8YLR055C ARV1Q06541 321 aa10.36□□□□□ -0.75
SPT8YLR055C FEX1Q08913 375 aa10.36□□□□□ -0.75
SPT8YLR055C ATP14Q12349 124 aa10.36□□□□□ -0.75
SPT8YLR055C HTS1P07263 546 aaKnown RBP10.35□□□□□ -0.75
SPT8YLR055C SSO1P32867 290 aa10.35□□□□□ -0.75
SPT8YLR055C ASC1P38011 319 aaKnown RBP10.35□□□□□ -0.75
SPT8YLR055C NDE1P40215 560 aa10.35□□□□□ -0.75
SPT8YLR055C PFS2P42841 465 aaKnown RBP10.35□□□□□ -0.75
SPT8YLR055C PAC10P48363 199 aa10.35□□□□□ -0.75
SPT8YLR055C EXG2P52911 562 aa10.35□□□□□ -0.75
SPT8YLR055C MSS11Q03825 758 aa10.35□□□□□ -0.75
SPT8YLR055C YLR031WQ07978 186 aa10.35□□□□□ -0.75
SPT8YLR055C YLR040CQ07988 224 aa10.35□□□□□ -0.75
SPT8YLR055C FEX2Q08991 375 aa10.35□□□□□ -0.75
SPT8YLR055C SRO7Q12038 1033 aa10.35□□□□□ -0.75
SPT8YLR055C BSC1Q12140 328 aa10.35□□□□□ -0.75
SPT8YLR055C CAN1P04817 590 aa10.35□□□□□ -0.75
SPT8YLR055C PEP4P07267 405 aaKnown RBP10.35□□□□□ -0.75
SPT8YLR055C SEC61P32915 480 aa10.35□□□□□ -0.75
SPT8YLR055C YHR127WP38833 243 aaKnown RBP10.35□□□□□ -0.75
SPT8YLR055C YIL108WP40483 696 aaKnown RBP10.35□□□□□ -0.75
SPT8YLR055C YGR079WP53249 370 aa10.35□□□□□ -0.75
SPT8YLR055C PLB2Q03674 706 aa10.35□□□□□ -0.75
SPT8YLR055C PUN1Q06991 263 aa10.35□□□□□ -0.75
SPT8YLR055C MKK1P32490 508 aa10.34□□□□□ -0.75
SPT8YLR055C SUR1P33300 382 aa10.34□□□□□ -0.75
SPT8YLR055C GIM4P40005 111 aaKnown RBP10.34□□□□□ -0.75
SPT8YLR055C SCS7Q03529 384 aa10.34□□□□□ -0.75
SPT8YLR055C MRPL35Q06678 367 aa10.34□□□□□ -0.75
SPT8YLR055C TY1A-NL1Q12391 440 aaKnown RBP10.34□□□□□ -0.75
SPT8YLR055C RAS1P01119 309 aa10.33□□□□□ -0.76
SPT8YLR055C PET127P32606 800 aa10.33□□□□□ -0.76
SPT8YLR055C SHE1P38200 338 aa10.33□□□□□ -0.76
SPT8YLR055C SWS2P53937 143 aa10.33□□□□□ -0.76
SPT8YLR055C YDR444WQ04093 687 aa10.33□□□□□ -0.76
SPT8YLR055C SYC1Q08553 188 aaPredicted RBP10.33□□□□□ -0.76
SPT8YLR055C FRE3Q08905 711 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-LR1P0C2J4 438 aa10.33□□□□□ -0.76
SPT8YLR055C DSF1P0CX08 502 aa10.33□□□□□ -0.76
SPT8YLR055C YNR073CP0CX09 502 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-FP0CX61 438 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-GR2P0CX62 438 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-CP25383 438 aa10.33□□□□□ -0.76
SPT8YLR055C PDR3P33200 976 aa10.33□□□□□ -0.76
SPT8YLR055C TMA19P35691 167 aaKnown RBP10.33□□□□□ -0.76
SPT8YLR055C ANR2P36090 516 aaPredicted RBP10.33□□□□□ -0.76
SPT8YLR055C DED81P38707 554 aaKnown RBP10.33□□□□□ -0.76
SPT8YLR055C RRF1P38771 230 aa10.33□□□□□ -0.76
SPT8YLR055C RTT105P40063 208 aa10.33□□□□□ -0.76
SPT8YLR055C PFA3P42836 336 aa10.33□□□□□ -0.76
SPT8YLR055C BNA6P43619 295 aa10.33□□□□□ -0.76
SPT8YLR055C JAC1P53193 184 aa10.33□□□□□ -0.76
SPT8YLR055C SYF2P53277 215 aaPredicted RBP10.33□□□□□ -0.76
SPT8YLR055C COS1P53822 381 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-DR2Q03483 438 aa10.33□□□□□ -0.76
SPT8YLR055C CTK1Q03957 528 aaKnown RBP10.33□□□□□ -0.76
SPT8YLR055C ELP6Q04868 273 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-BQ12260 438 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-OR2Q12293 438 aa10.33□□□□□ -0.76
SPT8YLR055C YOL114CQ12322 202 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-DR1Q12392 438 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-OR1Q12439 438 aa10.33□□□□□ -0.76
SPT8YLR055C YGL194C-AQ2V2P6 80 aa10.33□□□□□ -0.76
SPT8YLR055C TY2A-DR3Q99303 438 aa10.33□□□□□ -0.76
SPT8YLR055C GCN4P03069 281 aa10.32□□□□□ -0.76
SPT8YLR055C CAR2P07991 424 aaKnown RBP10.32□□□□□ -0.76
SPT8YLR055C BAR1P12630 587 aa10.32□□□□□ -0.76
SPT8YLR055C CTS1P29029 562 aa10.32□□□□□ -0.76
SPT8YLR055C TAT1P38085 619 aa10.32□□□□□ -0.76
SPT8YLR055C GIC1P38785 314 aa10.32□□□□□ -0.76
SPT8YLR055C FAU1P40099 211 aa10.32□□□□□ -0.76
SPT8YLR055C MET28P40573 187 aa10.32□□□□□ -0.76
SPT8YLR055C UBC12P52491 188 aa10.32□□□□□ -0.76
SPT8YLR055C YGR067CP53243 804 aa10.32□□□□□ -0.76
SPT8YLR055C YPL068CQ02749 293 aa10.32□□□□□ -0.76
SPT8YLR055C YDL129WQ07555 291 aa10.32□□□□□ -0.76
SPT8YLR055C PHO80P20052 293 aa10.31□□□□□ -0.76
SPT8YLR055C SCL1P21243 252 aaKnown RBP10.31□□□□□ -0.76
SPT8YLR055C MNN2P38069 597 aa10.31□□□□□ -0.76
SPT8YLR055C SCO2P38072 301 aa10.31□□□□□ -0.76
SPT8YLR055C LSM12P38828 187 aaKnown RBP10.31□□□□□ -0.76
SPT8YLR055C FET3P38993 636 aa10.31□□□□□ -0.76
SPT8YLR055C YPS6P40583 537 aa10.31□□□□□ -0.76
SPT8YLR055C LSM1P47017 172 aaKnown RBP10.31□□□□□ -0.76
SPT8YLR055C AAD10P47182 288 aa10.31□□□□□ -0.76
SPT8YLR055C GCV1P48015 400 aa10.31□□□□□ -0.76
SPT8YLR055C YMR130WQ04223 302 aa10.31□□□□□ -0.76
SPT8YLR055C YBR085C-AO43137 85 aa10.3□□□□□ -0.76
SPT8YLR055C RPS18AP0CX55 146 aaKnown RBP10.3□□□□□ -0.76
SPT8YLR055C RPS18BP0CX56 146 aaPredicted RBP10.3□□□□□ -0.76
SPT8YLR055C ZWF1P11412 505 aaKnown RBP10.3□□□□□ -0.76
SPT8YLR055C SNF6P18888 332 aa10.3□□□□□ -0.76
SPT8YLR055C CAM1P29547 415 aaKnown RBP10.3□□□□□ -0.76
SPT8YLR055C TUL1P36096 758 aa10.3□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms