RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C CLB1P24868 471 aa3.46□□□□□ -1.86
SED5YLR026C JNM1P36224 373 aa3.46□□□□□ -1.86
SED5YLR026C ZTA1P38230 334 aaKnown RBP3.46□□□□□ -1.86
SED5YLR026C IGD1P43598 195 aa3.46□□□□□ -1.86
SED5YLR026C FLC3P53121 802 aa3.46□□□□□ -1.86
SED5YLR026C TPS1Q00764 495 aaKnown RBP3.46□□□□□ -1.86
SED5YLR026C UBX2Q04228 584 aa3.46□□□□□ -1.86
SED5YLR026C SSK22P25390 1331 aaPredicted RBP3.45□□□□□ -1.86
SED5YLR026C FLO1P32768 1537 aa3.45□□□□□ -1.86
SED5YLR026C ALG1P16661 449 aa3.45□□□□□ -1.86
SED5YLR026C MRPL27P36526 146 aaPredicted RBP3.45□□□□□ -1.86
SED5YLR026C TCB2P48231 1178 aa3.45□□□□□ -1.86
SED5YLR026C AIM32Q04689 311 aa3.45□□□□□ -1.86
SED5YLR026C MCH1Q07376 486 aa3.45□□□□□ -1.86
SED5YLR026C FCY22Q12119 530 aa3.45□□□□□ -1.86
SED5YLR026C FOL3Q12676 427 aaPredicted RBP3.45□□□□□ -1.86
SED5YLR026C FLO11P08640 1367 aa3.44□□□□□ -1.86
SED5YLR026C RIM1P32445 135 aaKnown RBP3.44□□□□□ -1.86
SED5YLR026C MPE1P35728 441 aaKnown RBP3.44□□□□□ -1.86
SED5YLR026C OLA1P38219 394 aaKnown RBP3.44□□□□□ -1.86
SED5YLR026C ECM8P38246 354 aa3.44□□□□□ -1.86
SED5YLR026C INM1P38710 295 aa3.44□□□□□ -1.86
SED5YLR026C GPI16P38875 610 aa3.44□□□□□ -1.86
SED5YLR026C STN1P38960 494 aa3.44□□□□□ -1.86
SED5YLR026C ZIM17P42844 174 aa3.44□□□□□ -1.86
SED5YLR026C PIB2P53191 635 aa3.44□□□□□ -1.86
SED5YLR026C KTR6P54070 446 aa3.44□□□□□ -1.86
SED5YLR026C TOR1P35169 2470 aa3.43□□□□□ -1.86
SED5YLR026C RPC53P25441 422 aa3.43□□□□□ -1.86
SED5YLR026C COX13P32799 129 aa3.43□□□□□ -1.86
SED5YLR026C TOS2P50078 622 aa3.43□□□□□ -1.86
SED5YLR026C YIP5P53108 310 aa3.43□□□□□ -1.86
SED5YLR026C AEP3Q12089 606 aa3.43□□□□□ -1.86
SED5YLR026C HTZ1Q12692 134 aaKnown RBP3.43□□□□□ -1.86
SED5YLR026C NUM1Q00402 2748 aa3.43□□□□□ -1.86
SED5YLR026C UBR2Q07963 1872 aa3.43□□□□□ -1.86
SED5YLR026C PDX1P16451 410 aa3.42□□□□□ -1.86
SED5YLR026C RAD5P32849 1169 aaPredicted RBP3.42□□□□□ -1.86
SED5YLR026C YFL040WP43562 540 aa3.42□□□□□ -1.86
SED5YLR026C RUP1Q12242 671 aa3.42□□□□□ -1.86
SED5YLR026C PAB1P04147 577 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
SED5YLR026C OPI3P05375 206 aa3.41□□□□□ -1.86
SED5YLR026C GPX2P38143 162 aa3.41□□□□□ -1.86
SED5YLR026C FAD1P38913 306 aa3.41□□□□□ -1.86
SED5YLR026C SEC9P40357 651 aa3.41□□□□□ -1.86
SED5YLR026C ATP22P50273 684 aaPredicted RBP3.41□□□□□ -1.86
SED5YLR026C YLR456WQ06199 204 aa3.41□□□□□ -1.86
SED5YLR026C YDL199CQ12407 687 aa3.41□□□□□ -1.86
SED5YLR026C ECM29P38737 1868 aa3.41□□□□□ -1.86
SED5YLR026C DUR1,2P32528 1835 aaKnown RBP3.4□□□□□ -1.86
SED5YLR026C CPR2P23285 205 aa3.4□□□□□ -1.87
SED5YLR026C DEP1P31385 405 aa3.4□□□□□ -1.87
SED5YLR026C DPH2P32461 534 aa3.4□□□□□ -1.87
SED5YLR026C YLR345WQ06137 509 aa3.4□□□□□ -1.87
SED5YLR026C YDL114WQ07530 308 aa3.4□□□□□ -1.87
SED5YLR026C CMK2P22517 447 aa3.39□□□□□ -1.87
SED5YLR026C FUN26P31381 517 aa3.39□□□□□ -1.87
SED5YLR026C UIP5P36137 443 aa3.39□□□□□ -1.87
SED5YLR026C STE24P47154 453 aa3.39□□□□□ -1.87
SED5YLR026C TRM112P53738 135 aaPredicted RBP3.39□□□□□ -1.87
SED5YLR026C YHC1Q05900 231 aaKnown RBP3.39□□□□□ -1.87
SED5YLR026C TY3A-GQ12173 290 aa3.39□□□□□ -1.87
SED5YLR026C RNH203Q12338 110 aa3.39□□□□□ -1.87
SED5YLR026C PRM7Q12459 698 aa3.39□□□□□ -1.87
SED5YLR026C TY3A-IQ99219 290 aa3.39□□□□□ -1.87
SED5YLR026C ZUO1P32527 433 aaKnown RBP3.38□□□□□ -1.87
SED5YLR026C ECT1P33412 323 aa3.38□□□□□ -1.87
SED5YLR026C SKT5P34226 696 aa3.38□□□□□ -1.87
SED5YLR026C SPL2P38839 148 aa3.38□□□□□ -1.87
SED5YLR026C ATM1P40416 690 aa3.38□□□□□ -1.87
SED5YLR026C YFL012WP43580 148 aa3.38□□□□□ -1.87
SED5YLR026C YDR341CQ05506 607 aaKnown RBP3.38□□□□□ -1.87
SED5YLR026C PIN3Q06449 215 aa3.38□□□□□ -1.87
SED5YLR026C YOP1Q12402 180 aa3.38□□□□□ -1.87
SED5YLR026C RAX2Q12465 1220 aa3.38□□□□□ -1.87
SED5YLR026C TOR2P32600 2474 aaKnown RBP3.37□□□□□ -1.87
SED5YLR026C TPK3P05986 398 aa3.37□□□□□ -1.87
SED5YLR026C MCR1P36060 302 aaKnown RBP3.37□□□□□ -1.87
SED5YLR026C WSC4P38739 605 aa3.37□□□□□ -1.87
SED5YLR026C GEP4P38812 185 aa3.37□□□□□ -1.87
SED5YLR026C YER184CP39961 794 aa3.37□□□□□ -1.87
SED5YLR026C RRN9P53437 365 aa3.37□□□□□ -1.87
SED5YLR026C RPL21AQ02753 160 aaKnown RBP3.37□□□□□ -1.87
SED5YLR026C IRC4Q03036 179 aa3.37□□□□□ -1.87
SED5YLR026C ENT5Q03769 411 aaKnown RBP3.37□□□□□ -1.87
SED5YLR026C ECM7Q06200 448 aa3.37□□□□□ -1.87
SED5YLR026C RPL21BQ12672 160 aaKnown RBP3.37□□□□□ -1.87
SED5YLR026C SLM5P25345 492 aaKnown RBP3.36□□□□□ -1.87
SED5YLR026C TIR2P33890 251 aa3.36□□□□□ -1.87
SED5YLR026C QDR3P38227 689 aa3.36□□□□□ -1.87
SED5YLR026C BMT2P38278 337 aa3.36□□□□□ -1.87
SED5YLR026C PMT5P52867 743 aa3.36□□□□□ -1.87
SED5YLR026C YGR111WP53265 400 aa3.36□□□□□ -1.87
SED5YLR026C UAF30Q08747 228 aa3.36□□□□□ -1.87
SED5YLR026C MCT1Q12283 360 aa3.36□□□□□ -1.87
SED5YLR026C NRP1P32770 719 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
SED5YLR026C SPO23P33757 523 aa3.35□□□□□ -1.87
SED5YLR026C DTR1P38125 572 aa3.35□□□□□ -1.87
SED5YLR026C VAB2P40003 282 aa3.35□□□□□ -1.87
SED5YLR026C ROG1P53118 685 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms