RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C CBS1P14066 229 aa2.88□□□□□ -1.95
SDO1YLR022C PRP16P15938 1071 aaPredicted RBP2.88□□□□□ -1.95
SDO1YLR022C CLN1P20437 546 aa2.88□□□□□ -1.95
SDO1YLR022C SLY1P22213 666 aa2.88□□□□□ -1.95
SDO1YLR022C YCK1P23291 538 aa2.88□□□□□ -1.95
SDO1YLR022C PHD1P36093 366 aa2.88□□□□□ -1.95
SDO1YLR022C TUL1P36096 758 aa2.88□□□□□ -1.95
SDO1YLR022C DIA4P38705 446 aaPredicted RBP2.88□□□□□ -1.95
SDO1YLR022C OTU2P38747 307 aaKnown RBP2.88□□□□□ -1.95
SDO1YLR022C POP2P39008 433 aa2.88□□□□□ -1.95
SDO1YLR022C GAT2P40209 560 aa2.88□□□□□ -1.95
SDO1YLR022C HOC1P47124 396 aa2.88□□□□□ -1.95
SDO1YLR022C AAD10P47182 288 aa2.88□□□□□ -1.95
SDO1YLR022C YGR066CP53242 292 aa2.88□□□□□ -1.95
SDO1YLR022C YGR250CP53316 781 aaKnown RBP2.88□□□□□ -1.95
SDO1YLR022C PDR16P53860 351 aaKnown RBP2.88□□□□□ -1.95
SDO1YLR022C PRP38Q00723 242 aaPredicted RBP2.88□□□□□ -1.95
SDO1YLR022C PPT2Q12036 173 aa2.88□□□□□ -1.95
SDO1YLR022C GTT2Q12390 233 aa2.88□□□□□ -1.95
SDO1YLR022C YOR032W-AQ8TGS1 66 aa2.88□□□□□ -1.95
SDO1YLR022C IZH4Q99393 312 aa2.88□□□□□ -1.95
SDO1YLR022C YBR085C-AO43137 85 aa2.87□□□□□ -1.95
SDO1YLR022C SRV2P17555 526 aaKnown RBP2.87□□□□□ -1.95
SDO1YLR022C TRX1P22217 103 aaKnown RBP2.87□□□□□ -1.95
SDO1YLR022C CHA1P25379 360 aaKnown RBP2.87□□□□□ -1.95
SDO1YLR022C ERG9P29704 444 aa2.87□□□□□ -1.95
SDO1YLR022C PUP2P32379 260 aa2.87□□□□□ -1.95
SDO1YLR022C ATP11P32453 318 aa2.87□□□□□ -1.95
SDO1YLR022C MGM101P32787 269 aaKnown RBP2.87□□□□□ -1.95
SDO1YLR022C IMP3P32899 183 aaPredicted RBP2.87□□□□□ -1.95
SDO1YLR022C LOS1P33418 1100 aaPredicted RBP2.87□□□□□ -1.95
SDO1YLR022C YKL102CP34249 101 aa2.87□□□□□ -1.95
SDO1YLR022C STB6P36085 766 aa2.87□□□□□ -1.95
SDO1YLR022C SDS24P38314 527 aa2.87□□□□□ -1.95
SDO1YLR022C YGP1P38616 354 aaKnown RBP2.87□□□□□ -1.95
SDO1YLR022C AIM18P38884 321 aa2.87□□□□□ -1.95
SDO1YLR022C KRE9P39005 276 aa2.87□□□□□ -1.95
SDO1YLR022C VPS52P39904 641 aa2.87□□□□□ -1.95
SDO1YLR022C SLZ1P40167 298 aa2.87□□□□□ -1.95
SDO1YLR022C YMR144WP40214 342 aaKnown RBP2.87□□□□□ -1.95
SDO1YLR022C SEC28P40509 296 aaKnown RBP2.87□□□□□ -1.95
SDO1YLR022C ECO1P43605 281 aa2.87□□□□□ -1.95
SDO1YLR022C YJL055WP47044 245 aa2.87□□□□□ -1.95
SDO1YLR022C EOS1P53938 366 aa2.87□□□□□ -1.95
SDO1YLR022C OSH6Q02201 448 aa2.87□□□□□ -1.95
SDO1YLR022C RPM2Q02773 1202 aa2.87□□□□□ -1.95
SDO1YLR022C RAD30Q04049 632 aa2.87□□□□□ -1.95
SDO1YLR022C YDR286CQ05530 114 aa2.87□□□□□ -1.95
SDO1YLR022C AAD15Q08361 143 aa2.87□□□□□ -1.95
SDO1YLR022C MSA1Q08471 629 aa2.87□□□□□ -1.95
SDO1YLR022C PFK27Q12471 397 aaPredicted RBP2.87□□□□□ -1.95
SDO1YLR022C YJR112W-AQ3E743 109 aa2.87□□□□□ -1.95
SDO1YLR022C FAS1P07149 2051 aaKnown RBP2.86□□□□□ -1.95
SDO1YLR022C BLM10P43583 2143 aa2.86□□□□□ -1.95
SDO1YLR022C CAR1P00812 333 aaKnown RBP2.86□□□□□ -1.95
SDO1YLR022C ARG4P04076 463 aaPredicted RBP2.86□□□□□ -1.95
SDO1YLR022C DFR1P07807 211 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
SDO1YLR022C EST1P17214 699 aaPredicted RBP2.86□□□□□ -1.95
SDO1YLR022C DBF2P22204 572 aa2.86□□□□□ -1.95
SDO1YLR022C ACH1P32316 526 aa2.86□□□□□ -1.95
SDO1YLR022C HXT3P32466 567 aaKnown RBP2.86□□□□□ -1.95
SDO1YLR022C HIR2P32480 875 aa2.86□□□□□ -1.95
SDO1YLR022C SWH1P35845 1188 aa2.86□□□□□ -1.95
SDO1YLR022C LDB7P38210 180 aa2.86□□□□□ -1.95
SDO1YLR022C YBP1P38315 674 aa2.86□□□□□ -1.95
SDO1YLR022C YNL247WP53852 767 aaKnown RBP2.86□□□□□ -1.95
SDO1YLR022C JJJ1P53863 590 aa2.86□□□□□ -1.95
SDO1YLR022C EFM6P53970 246 aa2.86□□□□□ -1.95
SDO1YLR022C MSS11Q03825 758 aa2.86□□□□□ -1.95
SDO1YLR022C GAS2Q06135 555 aa2.86□□□□□ -1.95
SDO1YLR022C PSR1Q07800 427 aa2.86□□□□□ -1.95
SDO1YLR022C CUE5Q08412 411 aaKnown RBP2.86□□□□□ -1.95
SDO1YLR022C TMC1Q08422 150 aaPredicted RBP2.86□□□□□ -1.95
SDO1YLR022C RDR1Q08904 546 aa2.86□□□□□ -1.95
SDO1YLR022C PAR32Q12515 295 aaKnown RBP2.86□□□□□ -1.95
SDO1YLR022C SPO24Q3E752 67 aa2.86□□□□□ -1.95
SDO1YLR022C CLB1P24868 471 aa2.85□□□□□ -1.95
SDO1YLR022C PAP1P29468 568 aaKnown RBP2.85□□□□□ -1.95
SDO1YLR022C SNC1P31109 117 aa2.85□□□□□ -1.95
SDO1YLR022C PDB1P32473 366 aaKnown RBP2.85□□□□□ -1.95
SDO1YLR022C NIP100P33420 868 aa2.85□□□□□ -1.95
SDO1YLR022C PRX1P34227 261 aaKnown RBP2.85□□□□□ -1.95
SDO1YLR022C AUR1P36107 401 aaPredicted RBP2.85□□□□□ -1.95
SDO1YLR022C YBR062CP38239 180 aa2.85□□□□□ -1.95
SDO1YLR022C MDM31P38880 579 aa2.85□□□□□ -1.95
SDO1YLR022C YHR218WP38899 603 aa2.85□□□□□ -1.95
SDO1YLR022C ALG8P40351 577 aa2.85□□□□□ -1.95
SDO1YLR022C MET18P40469 1032 aa2.85□□□□□ -1.95
SDO1YLR022C RAD17P48581 401 aa2.85□□□□□ -1.95
SDO1YLR022C TOM22P49334 152 aa2.85□□□□□ -1.95
SDO1YLR022C YEH1Q07804 573 aa2.85□□□□□ -1.95
SDO1YLR022C YEH2Q07950 538 aa2.85□□□□□ -1.95
SDO1YLR022C YOR012WQ12351 137 aa2.85□□□□□ -1.95
SDO1YLR022C SKS1Q12505 502 aa2.85□□□□□ -1.95
SDO1YLR022C FLO9P39712 1322 aa2.85□□□□□ -1.95
SDO1YLR022C RPL15AP05748 204 aaKnown RBP2.84□□□□□ -1.95
SDO1YLR022C CDC36P06100 191 aaPredicted RBP2.84□□□□□ -1.95
SDO1YLR022C PUT2P07275 575 aa2.84□□□□□ -1.95
SDO1YLR022C MSS116P15424 664 aaKnown RBP2.84□□□□□ -1.95
SDO1YLR022C MDH1P17505 334 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms