RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W IVY1Q04934 453 aa2.31□□□□□ -2.04
SDC25YLL016W YOL073CQ08232 322 aa2.31□□□□□ -2.04
SDC25YLL016W ERP3Q12403 225 aa2.31□□□□□ -2.04
SDC25YLL016W PRP46Q12417 451 aaPredicted RBP2.31□□□□□ -2.04
SDC25YLL016W UBA3Q99344 299 aa2.31□□□□□ -2.04
SDC25YLL016W TEL1P38110 2787 aa2.3□□□□□ -2.04
SDC25YLL016W YPT1P01123 206 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W TPK3P05986 398 aa2.3□□□□□ -2.04
SDC25YLL016W ARF1P11076 181 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W CKI1P20485 582 aa2.3□□□□□ -2.04
SDC25YLL016W MBR1P23493 339 aa2.3□□□□□ -2.04
SDC25YLL016W RVS161P25343 265 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W RPL5P26321 297 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W VMA5P31412 392 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W ACH1P32316 526 aa2.3□□□□□ -2.04
SDC25YLL016W YPS6P40583 537 aa2.3□□□□□ -2.04
SDC25YLL016W HXT9P40885 567 aa2.3□□□□□ -2.04
SDC25YLL016W UBP8P50102 471 aa2.3□□□□□ -2.04
SDC25YLL016W HXT11P54862 567 aa2.3□□□□□ -2.04
SDC25YLL016W MUK1Q02866 612 aa2.3□□□□□ -2.04
SDC25YLL016W MRPS17Q03246 237 aaPredicted RBP2.3□□□□□ -2.04
SDC25YLL016W RSN1Q03516 953 aa2.3□□□□□ -2.04
SDC25YLL016W URH1Q04179 340 aa2.3□□□□□ -2.04
SDC25YLL016W MYO5Q04439 1219 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W RPL12AP0CX53 165 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W RPL12BP0CX54 165 aa2.3□□□□□ -2.04
SDC25YLL016W MEI5P32489 222 aa2.3□□□□□ -2.04
SDC25YLL016W TMT1P32643 299 aa2.3□□□□□ -2.04
SDC25YLL016W ECM4P36156 370 aa2.3□□□□□ -2.04
SDC25YLL016W TDA11P38854 504 aa2.3□□□□□ -2.04
SDC25YLL016W CDC1P40986 491 aa2.3□□□□□ -2.04
SDC25YLL016W HIT1P46973 164 aa2.3□□□□□ -2.04
SDC25YLL016W STE24P47154 453 aa2.3□□□□□ -2.04
SDC25YLL016W YJR154WP47181 346 aa2.3□□□□□ -2.04
SDC25YLL016W SSN8P47821 323 aa2.3□□□□□ -2.04
SDC25YLL016W YDL186WP48568 277 aa2.3□□□□□ -2.04
SDC25YLL016W BIO3P50277 480 aa2.3□□□□□ -2.04
SDC25YLL016W RET3P53600 189 aa2.3□□□□□ -2.04
SDC25YLL016W SLD5Q03406 294 aa2.3□□□□□ -2.04
SDC25YLL016W NUP53Q03790 475 aa2.3□□□□□ -2.04
SDC25YLL016W RVB1Q03940 463 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W INM2Q05533 292 aa2.3□□□□□ -2.04
SDC25YLL016W GLO2Q05584 274 aa2.3□□□□□ -2.04
SDC25YLL016W SMD2Q06217 110 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W CMS1Q07897 291 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W YOR029WQ12243 111 aa2.3□□□□□ -2.04
SDC25YLL016W AIM45Q12480 344 aaKnown RBP2.3□□□□□ -2.04
SDC25YLL016W MRP1P10662 321 aaKnown RBP2.29□□□□□ -2.04
SDC25YLL016W NHP6BP11633 99 aaKnown RBP2.29□□□□□ -2.04
SDC25YLL016W SPO12P17123 173 aa2.29□□□□□ -2.04
SDC25YLL016W KIN3P22209 435 aa2.29□□□□□ -2.04
SDC25YLL016W POP5P28005 173 aa2.29□□□□□ -2.04
SDC25YLL016W RSM22P36056 628 aa2.29□□□□□ -2.04
SDC25YLL016W YHR182WP38870 785 aa2.29□□□□□ -2.04
SDC25YLL016W YHB1P39676 399 aaKnown RBP2.29□□□□□ -2.04
SDC25YLL016W EXO1P39875 702 aa2.29□□□□□ -2.04
SDC25YLL016W BTT1P40314 149 aaPredicted RBP2.29□□□□□ -2.04
SDC25YLL016W SCD6P45978 349 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SDC25YLL016W ASI1P54074 624 aa2.29□□□□□ -2.04
SDC25YLL016W LGE1Q02796 332 aaKnown RBP2.29□□□□□ -2.04
SDC25YLL016W PUS9Q12069 462 aa2.29□□□□□ -2.04
SDC25YLL016W YPR022CQ12139 1133 aa2.29□□□□□ -2.04
SDC25YLL016W SIA1Q12212 622 aa2.29□□□□□ -2.04
SDC25YLL016W ATG34Q12292 412 aa2.29□□□□□ -2.04
SDC25YLL016W RRI1Q12468 440 aa2.29□□□□□ -2.04
SDC25YLL016W TDH3P00359 332 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SDC25YLL016W PMA2P19657 947 aa2.29□□□□□ -2.04
SDC25YLL016W OMA1P36163 345 aa2.29□□□□□ -2.04
SDC25YLL016W RIM2P38127 377 aa2.29□□□□□ -2.04
SDC25YLL016W YIR014WP40570 242 aa2.29□□□□□ -2.04
SDC25YLL016W FMP33P46998 180 aa2.29□□□□□ -2.04
SDC25YLL016W AIM24P47127 394 aa2.29□□□□□ -2.04
SDC25YLL016W YNL234WP53857 426 aa2.29□□□□□ -2.04
SDC25YLL016W GPI15P53961 229 aa2.29□□□□□ -2.04
SDC25YLL016W SLT2Q00772 484 aa2.29□□□□□ -2.04
SDC25YLL016W ARP10Q04549 284 aa2.29□□□□□ -2.04
SDC25YLL016W PAM18Q07914 168 aa2.29□□□□□ -2.04
SDC25YLL016W SET6Q12529 373 aa2.29□□□□□ -2.04
SDC25YLL016W YOS9Q99220 542 aa2.29□□□□□ -2.04
SDC25YLL016W MSF1P08425 469 aa2.28□□□□□ -2.04
SDC25YLL016W MATALPHA1P0CY06 175 aa2.28□□□□□ -2.04
SDC25YLL016W HMLALPHA1P0CY07 175 aa2.28□□□□□ -2.04
SDC25YLL016W POL30P15873 258 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W YCP4P25349 247 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W MXR2P25566 168 aa2.28□□□□□ -2.04
SDC25YLL016W SNC1P31109 117 aa2.28□□□□□ -2.04
SDC25YLL016W THI80P35202 319 aa2.28□□□□□ -2.04
SDC25YLL016W HIS2P38635 335 aa2.28□□□□□ -2.04
SDC25YLL016W MOB1P40484 314 aa2.28□□□□□ -2.04
SDC25YLL016W CDC40P40968 455 aaPredicted RBP2.28□□□□□ -2.04
SDC25YLL016W IMD3P50095 523 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W ESBP6P53918 673 aa2.28□□□□□ -2.04
SDC25YLL016W NAT4Q04751 285 aa2.28□□□□□ -2.04
SDC25YLL016W GMC2Q06201 188 aa2.28□□□□□ -2.04
SDC25YLL016W CDC43P18898 376 aa2.28□□□□□ -2.04
SDC25YLL016W COQ1P18900 473 aa2.28□□□□□ -2.04
SDC25YLL016W PUT3P25502 979 aaPredicted RBP2.28□□□□□ -2.04
SDC25YLL016W YKL097CP34245 136 aa2.28□□□□□ -2.04
SDC25YLL016W FLO10P36170 1169 aa2.28□□□□□ -2.04
SDC25YLL016W YCR041WP37265 110 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms