RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR1	YKR101W	RPL20A	P0CX23	172 aa	Known RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	RPL20B	P0CX24	172 aa	Predicted RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	MSS116	P15424	664 aa	Known RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	PUT3	P25502	979 aa	Predicted RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	RAD23	P32628	398 aa	Known RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	RIB5	P38145	238 aa		4.14	□□□□□ -1.75
SIR1	YKR101W	JLP2	P40206	208 aa		4.14	□□□□□ -1.75
SIR1	YKR101W	YMR134W	P40207	237 aa		4.14	□□□□□ -1.75
SIR1	YKR101W	CDC40	P40968	455 aa	Predicted RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SIR1	YKR101W	CAR2	P07991	424 aa	Known RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	ATR1	P13090	542 aa		4.14	□□□□□ -1.75
SIR1	YKR101W	YUR1	P26725	428 aa		4.14	□□□□□ -1.75
SIR1	YKR101W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SIR1	YKR101W	CHK1	P38147	527 aa		4.14	□□□□□ -1.75
SIR1	YKR101W	MIX23	P38162	196 aa		4.14	□□□□□ -1.75
SIR1	YKR101W	CCT4	P39078	528 aa	Known RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	ERV41	Q04651	352 aa		4.14	□□□□□ -1.75
SIR1	YKR101W	ERP1	Q05359	219 aa	Known RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	DCP1	Q12517	231 aa	Predicted RBP	4.14	□□□□□ -1.75
SIR1	YKR101W	RAD1	P06777	1100 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	MEK1	P24719	497 aa	Predicted RBP	4.13	□□□□□ -1.75
SIR1	YKR101W	PHA2	P32452	334 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	EFB1	P32471	206 aa	Known RBP	4.13	□□□□□ -1.75
SIR1	YKR101W	RPH1	P39956	796 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	VOA1	P53262	265 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	CAF40	P53829	373 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	GOR1	P53839	350 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	THP3	Q12049	470 aa	Known RBP	4.13	□□□□□ -1.75
SIR1	YKR101W	DET1	Q99288	334 aa	Known RBP	4.13	□□□□□ -1.75
SIR1	YKR101W	PDR5	P33302	1511 aa	Known RBP	4.13	□□□□□ -1.75
SIR1	YKR101W	FET3	P38993	636 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	GTO1	P48239	356 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	MND1	P53102	219 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	YLH47	Q06493	454 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	SRL1	Q08673	210 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	DAP1	Q12091	152 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	SET6	Q12529	373 aa		4.13	□□□□□ -1.75
SIR1	YKR101W	DNF3	Q12674	1656 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	STE2	D6VTK4	431 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	YUH1	P35127	236 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	MYO3	P36006	1272 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	PEX32	P38292	413 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	BTT1	P40314	149 aa	Predicted RBP	4.12	□□□□□ -1.75
SIR1	YKR101W	NAS6	P50086	228 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	COS10	P52924	374 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	YGR266W	P53326	701 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	APC5	Q08683	685 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	LDB17	Q12342	491 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	CEX1	Q12453	761 aa		4.12	□□□□□ -1.75
SIR1	YKR101W	NUP188	P52593	1655 aa	Known RBP	4.12	□□□□□ -1.75
SIR1	YKR101W	PDR11	P40550	1411 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	YKL162C	P36052	402 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	GEP4	P38812	185 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	BZZ1	P38822	633 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	SEC9	P40357	651 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	WSC2	P53832	503 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	RRN5	Q02983	363 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	YLR281C	Q05863	155 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	AHC1	Q12433	566 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	TIR2	P33890	251 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	NAT2	P37293	288 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	IST2	P38250	946 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	IML3	P38265	245 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	LST7	P53237	242 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	BUR2	Q05949	395 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	SHS1	Q07657	551 aa		4.11	□□□□□ -1.75
SIR1	YKR101W	GCN2	P15442	1659 aa		4.1	□□□□□ -1.75
SIR1	YKR101W	IML1	P47170	1584 aa		4.1	□□□□□ -1.75
SIR1	YKR101W	GDH1	P07262	454 aa	Known RBP	4.1	□□□□□ -1.75
SIR1	YKR101W	MRPL8	P22353	238 aa		4.1	□□□□□ -1.75
SIR1	YKR101W	HXT1	P32465	570 aa		4.1	□□□□□ -1.75
SIR1	YKR101W	MRPL37	P36532	105 aa		4.1	□□□□□ -1.75
SIR1	YKR101W	SCC4	P40090	624 aa		4.1	□□□□□ -1.75
SIR1	YKR101W	YCH1	P42937	148 aa		4.1	□□□□□ -1.75
SIR1	YKR101W	CWC22	P53333	577 aa	Known RBP	4.1	□□□□□ -1.75
SIR1	YKR101W	YOL075C	Q08234	1294 aa		4.1	□□□□□ -1.75
SIR1	YKR101W	DNL4	Q08387	944 aa	Predicted RBP	4.1	□□□□□ -1.75
SIR1	YKR101W	VMR1	P38735	1592 aa		4.1	□□□□□ -1.75
SIR1	YKR101W	SAR1	P20606	190 aa	Known RBP	4.09	□□□□□ -1.75
SIR1	YKR101W	MCK1	P21965	375 aa	Known RBP	4.09	□□□□□ -1.75
SIR1	YKR101W	YHK8	P38776	514 aa		4.09	□□□□□ -1.75
SIR1	YKR101W	SBE22	P38814	852 aa		4.09	□□□□□ -1.75
SIR1	YKR101W	RNH1	Q04740	348 aa		4.09	□□□□□ -1.75
SIR1	YKR101W	RGS2	Q99188	309 aa		4.09	□□□□□ -1.75
SIR1	YKR101W	CYC3	P06182	269 aa		4.09	□□□□□ -1.76
SIR1	YKR101W	DEG1	P31115	442 aa	Known RBP	4.09	□□□□□ -1.76
SIR1	YKR101W	DPH5	P32469	300 aa	Predicted RBP	4.09	□□□□□ -1.76
SIR1	YKR101W	MNS1	P32906	549 aa		4.09	□□□□□ -1.76
SIR1	YKR101W	TPO5	P36029	618 aa		4.09	□□□□□ -1.76
SIR1	YKR101W	PEX18	P38855	283 aa		4.09	□□□□□ -1.76
SIR1	YKR101W	UTP25	P40498	721 aa	Known RBP	4.09	□□□□□ -1.76
SIR1	YKR101W	CTK3	P46963	296 aa	Predicted RBP	4.09	□□□□□ -1.76
SIR1	YKR101W	YGR168C	P53293	376 aa		4.09	□□□□□ -1.76
SIR1	YKR101W	APC4	Q04601	652 aa		4.09	□□□□□ -1.76
SIR1	YKR101W	SSA3	P09435	649 aa	Known RBP	4.08	□□□□□ -1.76
SIR1	YKR101W	UNG1	P12887	359 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	CPR1	P14832	162 aa	Known RBP	4.08	□□□□□ -1.76
SIR1	YKR101W	ARF2	P19146	181 aa	Known RBP	4.08	□□□□□ -1.76
SIR1	YKR101W	MKK1	P32490	508 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms