RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
SKG1	YKR100C	KAR9	P32526	644 aa		4.58	□□□□□ -1.68
SKG1	YKR100C	IML3	P38265	245 aa		4.58	□□□□□ -1.68
SKG1	YKR100C	OM14	P38325	134 aa		4.58	□□□□□ -1.68
SKG1	YKR100C	YHR182W	P38870	785 aa		4.58	□□□□□ -1.68
SKG1	YKR100C	SYG1	P40528	902 aa		4.58	□□□□□ -1.68
SKG1	YKR100C	POP1	P41812	875 aa		4.58	□□□□□ -1.68
SKG1	YKR100C	YGR210C	P42942	411 aa		4.58	□□□□□ -1.68
SKG1	YKR100C	PIN3	Q06449	215 aa		4.58	□□□□□ -1.68
SKG1	YKR100C	DIS3	Q08162	1001 aa	Known RBP	4.58	□□□□□ -1.68
SKG1	YKR100C	ESA1	Q08649	445 aa		4.58	□□□□□ -1.68
SKG1	YKR100C	HHF1	P02309	103 aa	Known RBP	4.57	□□□□□ -1.68
SKG1	YKR100C	RRT2	P38332	387 aa		4.57	□□□□□ -1.68
SKG1	YKR100C	YGP1	P38616	354 aa	Known RBP	4.57	□□□□□ -1.68
SKG1	YKR100C	JEM1	P40358	645 aa		4.57	□□□□□ -1.68
SKG1	YKR100C	PRO2	P54885	456 aa	Known RBP	4.57	□□□□□ -1.68
SKG1	YKR100C	DON1	Q05610	365 aa		4.57	□□□□□ -1.68
SKG1	YKR100C	GRX8	Q05926	109 aa		4.57	□□□□□ -1.68
SKG1	YKR100C	TMC1	Q08422	150 aa	Predicted RBP	4.57	□□□□□ -1.68
SKG1	YKR100C	OLE1	P21147	510 aa	Known RBP	4.56	□□□□□ -1.68
SKG1	YKR100C	CPR4	P25334	318 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	RPB9	P27999	122 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	NAT2	P37293	288 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	SWD3	P38123	315 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	YER188W	P40103	239 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	MND1	P53102	219 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	GAS3	Q03655	524 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	MRPL35	Q06678	367 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	YOR376W	Q08900	122 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	SPO24	Q3E752	67 aa		4.56	□□□□□ -1.68
SKG1	YKR100C	MDM35	O60200	86 aa		4.55	□□□□□ -1.68
SKG1	YKR100C	VPS1	P21576	704 aa	Known RBP	4.55	□□□□□ -1.68
SKG1	YKR100C	SRO77	P38163	1010 aa		4.55	□□□□□ -1.68
SKG1	YKR100C	KAP104	P38217	918 aa	Known RBP	4.55	□□□□□ -1.68
SKG1	YKR100C	ISC1	P40015	477 aa	Known RBP	4.55	□□□□□ -1.68
SKG1	YKR100C	VMA13	P41807	478 aa	Known RBP	4.55	□□□□□ -1.68
SKG1	YKR100C	PET130	P47065	347 aa		4.55	□□□□□ -1.68
SKG1	YKR100C	SDT1	P53078	280 aa		4.55	□□□□□ -1.68
SKG1	YKR100C	POP6	P53218	158 aa		4.55	□□□□□ -1.68
SKG1	YKR100C	OGG1	P53397	376 aa	Predicted RBP	4.55	□□□□□ -1.68
SKG1	YKR100C	RPA49	Q01080	415 aa	Predicted RBP	4.55	□□□□□ -1.68
SKG1	YKR100C	PFK27	Q12471	397 aa	Predicted RBP	4.55	□□□□□ -1.68
SKG1	YKR100C	YDL007C-A	Q2V2Q0	85 aa		4.55	□□□□□ -1.68
SKG1	YKR100C	RPL31B	P0C2H9	113 aa	Known RBP	4.54	□□□□□ -1.68
SKG1	YKR100C	ISY1	P21374	235 aa	Predicted RBP	4.54	□□□□□ -1.68
SKG1	YKR100C	UBA1	P22515	1024 aa	Known RBP	4.54	□□□□□ -1.68
SKG1	YKR100C	FAA1	P30624	700 aa	Known RBP	4.54	□□□□□ -1.68
SKG1	YKR100C	CRM1	P30822	1084 aa	Known RBP	4.54	□□□□□ -1.68
SKG1	YKR100C	PMT2	P31382	759 aa		4.54	□□□□□ -1.68
SKG1	YKR100C	OPY1	P38271	328 aa		4.54	□□□□□ -1.68
SKG1	YKR100C	PTH1	P38876	190 aa	Known RBP	4.54	□□□□□ -1.68
SKG1	YKR100C	EDC3	P39998	551 aa	Known RBP	4.54	□□□□□ -1.68
SKG1	YKR100C	YMR144W	P40214	342 aa	Known RBP	4.54	□□□□□ -1.68
SKG1	YKR100C	LCB2	P40970	561 aa		4.54	□□□□□ -1.68
SKG1	YKR100C	URB2	P47108	1174 aa		4.54	□□□□□ -1.68
SKG1	YKR100C	VPS75	P53853	264 aa		4.54	□□□□□ -1.68
SKG1	YKR100C	RRG7	Q08774	242 aa	Predicted RBP	4.54	□□□□□ -1.68
SKG1	YKR100C	COX5A	P00424	153 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SKG1	YKR100C	CDC42	P19073	191 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	EPT1	P22140	391 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	YCR100C	P25606	316 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	MRE11	P32829	692 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	TRM7	P38238	310 aa	Known RBP	4.53	□□□□□ -1.68
SKG1	YKR100C	APE4	P38821	490 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	CYC2	P38909	366 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	IBA57	P47158	497 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	GOR1	P53839	350 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	ARO80	Q04052	950 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	YRM1	Q12340	786 aa		4.53	□□□□□ -1.68
SKG1	YKR100C	HIS1	P00498	297 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	TEF1	P02994	458 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	LEU4	P06208	619 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	SCH9	P11792	824 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	FUR1	P18562	216 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	ARO2	P28777	376 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	MTC6	P38849	526 aa		4.52	□□□□□ -1.69
SKG1	YKR100C	STN1	P38960	494 aa		4.52	□□□□□ -1.69
SKG1	YKR100C	PRE6	P40303	254 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	REE1	P40893	198 aa		4.52	□□□□□ -1.69
SKG1	YKR100C	ASN2	P49090	572 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	KTR6	P54070	446 aa		4.52	□□□□□ -1.69
SKG1	YKR100C	SED5	Q01590	340 aa		4.52	□□□□□ -1.69
SKG1	YKR100C	ARX1	Q03862	593 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	KAP95	Q06142	861 aa	Known RBP	4.52	□□□□□ -1.69
SKG1	YKR100C	MHR1	Q06630	226 aa		4.52	□□□□□ -1.69
SKG1	YKR100C	YOL107W	Q12239	342 aa		4.52	□□□□□ -1.69
SKG1	YKR100C	JIP3	O13555	125 aa		4.51	□□□□□ -1.69
SKG1	YKR100C	MET16	P18408	261 aa	Predicted RBP	4.51	□□□□□ -1.69
SKG1	YKR100C	HXT1	P32465	570 aa		4.51	□□□□□ -1.69
SKG1	YKR100C	YIL012W	P40551	113 aa		4.51	□□□□□ -1.69
SKG1	YKR100C	ALF1	P53904	254 aa		4.51	□□□□□ -1.69
SKG1	YKR100C	ODC1	Q03028	310 aa		4.51	□□□□□ -1.69
SKG1	YKR100C	CUE5	Q08412	411 aa	Known RBP	4.51	□□□□□ -1.69
SKG1	YKR100C	YPL199C	Q08954	240 aa		4.51	□□□□□ -1.69
SKG1	YKR100C	GAL7	P08431	366 aa		4.5	□□□□□ -1.69
SKG1	YKR100C	YAR066W	P0CX18	203 aa		4.5	□□□□□ -1.69
SKG1	YKR100C	YHR214W	P0CX19	203 aa		4.5	□□□□□ -1.69
SKG1	YKR100C	PHO84	P25297	587 aa	Known RBP	4.5	□□□□□ -1.69
SKG1	YKR100C	TRS85	P46944	698 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms