RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	YPR147C	Q06522	304 aa	Known RBP	3.57	□□□□□ -1.84
LOS1	YKL205W	RLM1	Q12224	676 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	DFG16	Q99234	619 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	FLO9	P39712	1322 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	CWP1	P28319	239 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	PPG1	P32838	368 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	YBR138C	P38277	524 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	PMT6	P42934	759 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	IRC5	P43610	853 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	HRI1	Q05905	244 aa	Known RBP	3.57	□□□□□ -1.84
LOS1	YKL205W	MCH4	Q08268	501 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	RKM1	Q08961	583 aa	Predicted RBP	3.57	□□□□□ -1.84
LOS1	YKL205W	ULA1	Q12059	462 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	YDL109C	Q12103	647 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	NTO1	Q12311	748 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	YPT1	P01123	206 aa	Known RBP	3.57	□□□□□ -1.84
LOS1	YKL205W	ARG81	P05085	880 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	RPL17A	P05740	184 aa	Known RBP	3.57	□□□□□ -1.84
LOS1	YKL205W	PRM5	P40476	318 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	RPE1	P46969	238 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	RPL17B	P46990	184 aa	Known RBP	3.57	□□□□□ -1.84
LOS1	YKL205W	CCC1	P47818	322 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	SPT20	P50875	604 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	YGL204C	P53089	101 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	ERG26	P53199	349 aa	Known RBP	3.57	□□□□□ -1.84
LOS1	YKL205W	TFB3	Q03290	321 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	DBP10	Q12389	995 aa	Known RBP	3.57	□□□□□ -1.84
LOS1	YKL205W	NKP1	Q12493	238 aa		3.57	□□□□□ -1.84
LOS1	YKL205W	TIF3	P34167	436 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	ZTA1	P38230	334 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	OCA5	P38738	679 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	HXT9	P40885	567 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	BNA3	P47039	444 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	YAE1	P47118	141 aa	Predicted RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	PGU1	P47180	361 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	RBL2	P48606	106 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	LSG1	P53145	640 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	NQM1	P53228	333 aa	Predicted RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	HXT11	P54862	567 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	SMX3	P54999	86 aa	Predicted RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	SNF8	Q12483	233 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	SRN2	Q99176	213 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	HTS1	P07263	546 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	YOL162W	P0CF19	215 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	EMP70	P32802	667 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	WBP1	P33767	430 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	TUL1	P36096	758 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	AIM3	P38266	947 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	YBR137W	P38276	179 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	PCL6	P40038	420 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	RRG9	P40156	214 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	YIL166C	P40445	542 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	SEC24	P40482	926 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	MSS2	P40990	351 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	YMR099C	Q03161	297 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	TRS23	Q03784	219 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	YDR514C	Q04408	483 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	REH1	Q06709	432 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	SSK1	Q07084	712 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	BRX1	Q08235	291 aa	Known RBP	3.56	□□□□□ -1.84
LOS1	YKL205W	AKR2	Q12013	749 aa		3.56	□□□□□ -1.84
LOS1	YKL205W	STF2	P16965	84 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	UTR1	P21373	530 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	CHA1	P25379	360 aa	Known RBP	3.55	□□□□□ -1.84
LOS1	YKL205W	PUP2	P32379	260 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	VPS17	P32913	551 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	UTP11	P34247	250 aa	Predicted RBP	3.55	□□□□□ -1.84
LOS1	YKL205W	VPS52	P39904	641 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	FCY21	P40039	528 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	ELP2	P42935	788 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	TRM9	P49957	279 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	KRE28	Q04431	385 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	YLR040C	Q07988	224 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	RPL24A	P04449	155 aa	Known RBP	3.55	□□□□□ -1.84
LOS1	YKL205W	NUF2	P33895	451 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	THI2	P38141	450 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	NSG1	P38837	291 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	COG3	P40094	801 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	GDS1	P41913	522 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	SNX41	Q04053	625 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	YMR130W	Q04223	302 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	ARP10	Q04549	284 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	VBA4	Q04602	768 aa	Known RBP	3.55	□□□□□ -1.84
LOS1	YKL205W	PAL1	Q05518	499 aa	Known RBP	3.55	□□□□□ -1.84
LOS1	YKL205W	FRE3	Q08905	711 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	RPS21B	Q3E754	87 aa	Known RBP	3.55	□□□□□ -1.84
LOS1	YKL205W	CHO1	P08456	276 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	CNA1	P23287	553 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	GRR1	P24814	1151 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	MEF1	P25039	761 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	BET3	P36149	193 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	TDP1	P38319	544 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	EGD2	P38879	174 aa	Known RBP	3.55	□□□□□ -1.84
LOS1	YKL205W	AST2	P39945	430 aa	Known RBP	3.55	□□□□□ -1.84
LOS1	YKL205W	CFD1	P40558	293 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	CAK1	P43568	368 aa	Predicted RBP	3.55	□□□□□ -1.84
LOS1	YKL205W	MET31	Q03081	177 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	OST6	Q03723	332 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	MRPL35	Q06678	367 aa		3.55	□□□□□ -1.84
LOS1	YKL205W	RCN2	Q12044	265 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms