RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	YMR310C	Q04867	317 aa	Predicted RBP	3.48	□□□□□ -1.85
EBP2	YKL172W	YLH47	Q06493	454 aa		3.48	□□□□□ -1.85
EBP2	YKL172W	DPH2	P32461	534 aa		3.47	□□□□□ -1.85
EBP2	YKL172W	MRPS9	P38120	278 aa		3.47	□□□□□ -1.85
EBP2	YKL172W	KEG1	P43614	200 aa		3.47	□□□□□ -1.85
EBP2	YKL172W	PRP38	Q00723	242 aa	Predicted RBP	3.47	□□□□□ -1.85
EBP2	YKL172W	TPS1	Q00764	495 aa	Known RBP	3.47	□□□□□ -1.85
EBP2	YKL172W	UTP6	Q02354	440 aa	Known RBP	3.47	□□□□□ -1.85
EBP2	YKL172W	ENT5	Q03769	411 aa	Known RBP	3.47	□□□□□ -1.85
EBP2	YKL172W	FSH2	Q05015	223 aa		3.47	□□□□□ -1.85
EBP2	YKL172W	DBP9	Q06218	594 aa	Known RBP	3.47	□□□□□ -1.85
EBP2	YKL172W	GLE1	Q12315	538 aa		3.47	□□□□□ -1.85
EBP2	YKL172W	CBP6	P07253	162 aa	Predicted RBP	3.46	□□□□□ -1.86
EBP2	YKL172W	CMK2	P22517	447 aa		3.46	□□□□□ -1.86
EBP2	YKL172W	GRR1	P24814	1151 aa		3.46	□□□□□ -1.86
EBP2	YKL172W	VAC7	P53950	1165 aa		3.46	□□□□□ -1.86
EBP2	YKL172W	RRB1	Q04225	511 aa	Known RBP	3.46	□□□□□ -1.86
EBP2	YKL172W	AIM33	Q04516	312 aa		3.46	□□□□□ -1.86
EBP2	YKL172W	NFI1	Q12216	726 aa		3.46	□□□□□ -1.86
EBP2	YKL172W	LDB17	Q12342	491 aa		3.46	□□□□□ -1.86
EBP2	YKL172W	SFG1	Q12507	346 aa		3.46	□□□□□ -1.86
EBP2	YKL172W	RPL23A	P0CX41	137 aa	Known RBP	3.45	□□□□□ -1.86
EBP2	YKL172W	RPL23B	P0CX42	137 aa	Known RBP	3.45	□□□□□ -1.86
EBP2	YKL172W	COS9	P36034	407 aa		3.45	□□□□□ -1.86
EBP2	YKL172W	PEX22	P39718	180 aa		3.45	□□□□□ -1.86
EBP2	YKL172W	CTK3	P46963	296 aa	Predicted RBP	3.45	□□□□□ -1.86
EBP2	YKL172W	YNL143C	P53908	130 aa		3.45	□□□□□ -1.86
EBP2	YKL172W	AQR1	P53943	586 aa		3.45	□□□□□ -1.86
EBP2	YKL172W	MCH1	Q07376	486 aa		3.45	□□□□□ -1.86
EBP2	YKL172W	MCT1	Q12283	360 aa		3.45	□□□□□ -1.86
EBP2	YKL172W	UBA3	Q99344	299 aa		3.45	□□□□□ -1.86
EBP2	YKL172W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.44	□□□□□ -1.86	not detected
EBP2	YKL172W	SIF2	P38262	535 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	DED81	P38707	554 aa	Known RBP	3.44	□□□□□ -1.86
EBP2	YKL172W	SEO1	P39709	593 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	RBG1	P39729	369 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	YJR030C	P47101	745 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	YGL262W	P53054	175 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	LST7	P53237	242 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	PRM1	P53835	661 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	ECM11	Q04110	302 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	YOL075C	Q08234	1294 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	YPQ1	Q12010	308 aa		3.44	□□□□□ -1.86
EBP2	YKL172W	AIM45	Q12480	344 aa	Known RBP	3.44	□□□□□ -1.86
EBP2	YKL172W	ASP3-2	P0CX77	362 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	ASP3-3	P0CX78	362 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	ASP3-4	P0CX79	362 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	ASP3-1	P0CZ17	362 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	UNG1	P12887	359 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	FAR1	P21268	830 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	MIR1	P23641	311 aa	Known RBP	3.43	□□□□□ -1.86
EBP2	YKL172W	ANP1	P32629	500 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	WSC4	P38739	605 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	YPT35	P38815	214 aa	Known RBP	3.43	□□□□□ -1.86
EBP2	YKL172W	EFM3	P47163	339 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	SMP3	Q04174	516 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	YLR177W	Q06251	628 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	ATP16	Q12165	160 aa		3.43	□□□□□ -1.86
EBP2	YKL172W	DET1	Q99288	334 aa	Known RBP	3.43	□□□□□ -1.86
EBP2	YKL172W	RPS16A	P0CX51	143 aa	Known RBP	3.42	□□□□□ -1.86
EBP2	YKL172W	RPS16B	P0CX52	143 aa	Known RBP	3.42	□□□□□ -1.86
EBP2	YKL172W	TAL1	P15019	335 aa	Known RBP	3.42	□□□□□ -1.86
EBP2	YKL172W	ARF2	P19146	181 aa	Known RBP	3.42	□□□□□ -1.86
EBP2	YKL172W	CKI1	P20485	582 aa		3.42	□□□□□ -1.86
EBP2	YKL172W	YEL043W	P32618	956 aa		3.42	□□□□□ -1.86
EBP2	YKL172W	MRPL27	P36526	146 aa	Predicted RBP	3.42	□□□□□ -1.86
EBP2	YKL172W	YHR122W	P38829	231 aa		3.42	□□□□□ -1.86
EBP2	YKL172W	YHC3	P47040	408 aa		3.42	□□□□□ -1.86
EBP2	YKL172W	CUE3	P53137	624 aa	Known RBP	3.42	□□□□□ -1.86
EBP2	YKL172W	RNH201	P53942	307 aa		3.42	□□□□□ -1.86
EBP2	YKL172W	GAS2	Q06135	555 aa		3.42	□□□□□ -1.86
EBP2	YKL172W	STE3	P06783	470 aa		3.41	□□□□□ -1.86
EBP2	YKL172W	ECT1	P33412	323 aa		3.41	□□□□□ -1.86
EBP2	YKL172W	UIP5	P36137	443 aa		3.41	□□□□□ -1.86
EBP2	YKL172W	YMR134W	P40207	237 aa		3.41	□□□□□ -1.86
EBP2	YKL172W	YNL320W	P42840	284 aa		3.41	□□□□□ -1.86
EBP2	YKL172W	AIM23	P47015	356 aa		3.41	□□□□□ -1.86
EBP2	YKL172W	PDR16	P53860	351 aa	Known RBP	3.41	□□□□□ -1.86
EBP2	YKL172W	SLT2	Q00772	484 aa		3.41	□□□□□ -1.86
EBP2	YKL172W	APC5	Q08683	685 aa		3.41	□□□□□ -1.86
EBP2	YKL172W	TOA1	P32773	286 aa		3.4	□□□□□ -1.87
EBP2	YKL172W	MRPS5	P33759	307 aa		3.4	□□□□□ -1.87
EBP2	YKL172W	PTK1	P36002	662 aa	Predicted RBP	3.4	□□□□□ -1.87
EBP2	YKL172W	YBR241C	P38142	488 aa		3.4	□□□□□ -1.87
EBP2	YKL172W	SHE3	P38272	425 aa	Known RBP	3.4	□□□□□ -1.87
EBP2	YKL172W	HEM14	P40012	539 aa		3.4	□□□□□ -1.87
EBP2	YKL172W	YIL089W	P40500	205 aa		3.4	□□□□□ -1.87
EBP2	YKL172W	PGU1	P47180	361 aa		3.4	□□□□□ -1.87
EBP2	YKL172W	SEH1	P53011	349 aa	Known RBP	3.4	□□□□□ -1.87
EBP2	YKL172W	YDR115W	Q04598	105 aa		3.4	□□□□□ -1.87
EBP2	YKL172W	ARR1	Q06596	294 aa		3.4	□□□□□ -1.87
EBP2	YKL172W	YBL111C	Q3E7Y5	667 aa		3.4	□□□□□ -1.87
EBP2	YKL172W	SAG1	P20840	650 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	OPI1	P21957	404 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	ZUO1	P32527	433 aa	Known RBP	3.39	□□□□□ -1.87
EBP2	YKL172W	SMI1	P32566	505 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	IST2	P38250	946 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	CAJ1	P39101	391 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	MOB2	P43563	287 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	BIO3	P50277	480 aa		3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms