RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	CDC9	P04819	755 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	NHP6A	P11632	93 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	MIR1	P23641	311 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	BUD5	P25300	642 aa	Predicted RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	HCM1	P25364	564 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	MET22	P32179	357 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	CYS4	P32582	507 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	OAR1	P35731	278 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	GLY1	P37303	387 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	AME1	P38313	324 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	YHR045W	P38775	560 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	ERV46	P39727	415 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	KRE29	P40026	464 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	CHS6	P40955	746 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	ALY2	P47029	1046 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	SLD3	P53135	668 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	DUO1	P53168	247 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	PKP2	P53170	491 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	YPR003C	P53394	754 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	BUD17	P53727	317 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	YNR062C	P53748	327 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	COG5	P53951	403 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	RHO3	Q00245	231 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	YMR206W	Q03695	313 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	MSC3	Q05812	728 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	SWC7	Q06707	132 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	PML1	Q07930	204 aa	Predicted RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	APC9	Q12107	265 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	HAL9	Q12180	1030 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	RRP42	Q12277	265 aa	Predicted RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	ISA2	Q12425	185 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	DCP1	Q12517	231 aa	Predicted RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	TPK2	P06245	380 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	RHO1	P06780	209 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	IMA3	P0CW40	589 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	IMA4	P0CW41	589 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	PET54	P10834	293 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	ZWF1	P11412	505 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	CBS1	P14066	229 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	PRE7	P23724	241 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	DCC1	P25559	380 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	MGR1	P25573	417 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	KAR4	P25583	335 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	SBA1	P28707	216 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	CTS1	P29029	562 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	RPS1A	P33442	255 aa	Known RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	SHG1	P38337	142 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	PPE1	P38796	400 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	BZZ1	P38822	633 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	YJL206C	P39529	758 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	RBG1	P39729	369 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	GIP2	P40036	548 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	RFC2	P40348	353 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	CFD1	P40558	293 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	CAF16	P43569	289 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	RMD8	P43620	662 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	SNG1	P46950	547 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	YGR026W	P53217	278 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	TRM112	P53738	135 aa	Predicted RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	KTR5	P53966	522 aa	Predicted RBP	4.6	□□□□□ -1.67
CPS1	YJL172W	YPL014W	Q02606	381 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	PRM15	Q03262	622 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	YLR283W	Q05867	314 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	NEJ1	Q06148	342 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	IMA2	Q08295	589 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	FEX2	Q08991	375 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	DAP1	Q12091	152 aa		4.6	□□□□□ -1.67
CPS1	YJL172W	ARF2	P19146	181 aa	Known RBP	4.59	□□□□□ -1.67
CPS1	YJL172W	BET2	P20133	325 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	SAR1	P20606	190 aa	Known RBP	4.59	□□□□□ -1.67
CPS1	YJL172W	MSN1	P22148	382 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	RFA1	P22336	621 aa	Known RBP	4.59	□□□□□ -1.67
CPS1	YJL172W	AIM17	P23180	465 aa	Known RBP	4.59	□□□□□ -1.67
CPS1	YJL172W	STE50	P25344	346 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	SGF29	P25554	259 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	HEM12	P32347	362 aa	Predicted RBP	4.59	□□□□□ -1.67
CPS1	YJL172W	ERG3	P32353	365 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	NDC1	P32500	655 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	SCM4	P32564	187 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	SPR1	P32603	445 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	YSC84	P32793	468 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	SNU114	P36048	1008 aa	Known RBP	4.59	□□□□□ -1.67
CPS1	YJL172W	YKL077W	P36081	392 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	FAT1	P38225	669 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	ICS2	P38284	255 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	SEC72	P39742	193 aa	Known RBP	4.59	□□□□□ -1.67
CPS1	YJL172W	EXO1	P39875	702 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	NTA1	P40354	457 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	LYS20	P48570	428 aa	Known RBP	4.59	□□□□□ -1.67
CPS1	YJL172W	DOC1	P53068	250 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
CPS1	YJL172W	HST3	P53687	447 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	MPP6	P53725	186 aa	Predicted RBP	4.59	□□□□□ -1.67
CPS1	YJL172W	CDC14	Q00684	551 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	OAZ1	Q02803	292 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	YPL071C	Q02864	156 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	ATC1	Q04005	294 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	DAL4	Q04895	635 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	CDC123	Q05791	360 aa		4.59	□□□□□ -1.67
CPS1	YJL172W	BLS1	Q06071	122 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 153.8 ms