RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W YHC1Q05900 231 aaKnown RBP3.28□□□□□ -1.88
BCD1YHR040W GPI11Q06636 219 aa3.28□□□□□ -1.88
BCD1YHR040W LUC7Q07508 261 aaPredicted RBP3.28□□□□□ -1.88
BCD1YHR040W FMP45Q07651 309 aa3.28□□□□□ -1.88
BCD1YHR040W LOT6Q07923 191 aa3.28□□□□□ -1.88
BCD1YHR040W IRC10Q08118 586 aa3.28□□□□□ -1.88
BCD1YHR040W RRT8Q08219 342 aa3.28□□□□□ -1.88
BCD1YHR040W THP1Q08231 455 aa3.28□□□□□ -1.88
BCD1YHR040W NDD1Q08887 554 aa3.28□□□□□ -1.88
BCD1YHR040W HER1Q12276 1246 aa3.28□□□□□ -1.88
BCD1YHR040W SFM1Q12314 213 aa3.28□□□□□ -1.88
BCD1YHR040W YBR255C-AQ3E776 120 aa3.28□□□□□ -1.88
BCD1YHR040W MHF1Q3E835 90 aa3.28□□□□□ -1.88
BCD1YHR040W PNO1Q99216 274 aaKnown RBP3.28□□□□□ -1.88
BCD1YHR040W RIB3Q99258 208 aa3.28□□□□□ -1.88
BCD1YHR040W UTP20P35194 2493 aaKnown RBP3.28□□□□□ -1.88
BCD1YHR040W PRP8P33334 2413 aaKnown RBP3.27□□□□□ -1.89
BCD1YHR040W YBR085C-AO43137 85 aa3.27□□□□□ -1.89
BCD1YHR040W SUC2P00724 532 aa3.27□□□□□ -1.89
BCD1YHR040W TPK3P05986 398 aa3.27□□□□□ -1.89
BCD1YHR040W RPC40P07703 335 aaKnown RBP3.27□□□□□ -1.89
BCD1YHR040W LAT1P12695 482 aaKnown RBP3.27□□□□□ -1.89
BCD1YHR040W GAL3P13045 520 aa3.27□□□□□ -1.89
BCD1YHR040W FEN2P25621 512 aaKnown RBP3.27□□□□□ -1.89
BCD1YHR040W ASF2P32448 525 aaPredicted RBP3.27□□□□□ -1.89
BCD1YHR040W TFB1P32776 642 aa3.27□□□□□ -1.89
BCD1YHR040W MRPL6P32904 214 aa3.27□□□□□ -1.89
BCD1YHR040W PHO11P35842 467 aa3.27□□□□□ -1.89
BCD1YHR040W DAD2P36162 133 aa3.27□□□□□ -1.89
BCD1YHR040W RIB1P38066 345 aa3.27□□□□□ -1.89
BCD1YHR040W FMP23P38231 175 aa3.27□□□□□ -1.89
BCD1YHR040W YBR285WP38354 144 aa3.27□□□□□ -1.89
BCD1YHR040W PHO12P38693 467 aa3.27□□□□□ -1.89
BCD1YHR040W PEX18P38855 283 aa3.27□□□□□ -1.89
BCD1YHR040W GIM4P40005 111 aaKnown RBP3.27□□□□□ -1.89
BCD1YHR040W DDI1P40087 428 aa3.27□□□□□ -1.89
BCD1YHR040W ATF1P40353 525 aa3.27□□□□□ -1.89
BCD1YHR040W YIL077CP40508 320 aa3.27□□□□□ -1.89
BCD1YHR040W YIR016WP40572 265 aa3.27□□□□□ -1.89
BCD1YHR040W BAP3P41815 604 aa3.27□□□□□ -1.89
BCD1YHR040W MEP2P41948 499 aa3.27□□□□□ -1.89
BCD1YHR040W STB2P46679 850 aa3.27□□□□□ -1.89
BCD1YHR040W YJR030CP47101 745 aa3.27□□□□□ -1.89
BCD1YHR040W YPT32P51996 222 aaKnown RBP3.27□□□□□ -1.89
BCD1YHR040W NQM1P53228 333 aaPredicted RBP3.27□□□□□ -1.89
BCD1YHR040W YGR054WP53235 642 aaKnown RBP3.27□□□□□ -1.89
BCD1YHR040W TWF1P53250 332 aa3.27□□□□□ -1.89
BCD1YHR040W SNF12P53628 566 aa3.27□□□□□ -1.89
BCD1YHR040W KAP120Q02932 1032 aa3.27□□□□□ -1.89
BCD1YHR040W PIR1Q03178 341 aa3.27□□□□□ -1.89
BCD1YHR040W YMR010WQ03687 405 aa3.27□□□□□ -1.89
BCD1YHR040W GRX3Q03835 250 aa3.27□□□□□ -1.89
BCD1YHR040W ARX1Q03862 593 aaKnown RBP3.27□□□□□ -1.89
BCD1YHR040W EMI2Q04409 500 aaKnown RBP3.27□□□□□ -1.89
BCD1YHR040W ARP10Q04549 284 aa3.27□□□□□ -1.89
BCD1YHR040W ROY1Q04847 553 aa3.27□□□□□ -1.89
BCD1YHR040W FMP42Q04991 504 aa3.27□□□□□ -1.89
BCD1YHR040W HOF1Q05080 669 aa3.27□□□□□ -1.89
BCD1YHR040W YMR034CQ05131 434 aaPredicted RBP3.27□□□□□ -1.89
BCD1YHR040W VPS74Q06385 345 aa3.27□□□□□ -1.89
BCD1YHR040W FRE5Q08908 694 aa3.27□□□□□ -1.89
BCD1YHR040W JLP1Q12358 412 aa3.27□□□□□ -1.89
BCD1YHR040W YDL199CQ12407 687 aa3.27□□□□□ -1.89
BCD1YHR040W YDR034W-BQ6Q5X2 51 aa3.27□□□□□ -1.89
BCD1YHR040W YOR019WQ99248 730 aa3.27□□□□□ -1.89
BCD1YHR040W ALG7P07286 448 aa3.26□□□□□ -1.89
BCD1YHR040W YKR104WP0CE69 306 aa3.26□□□□□ -1.89
BCD1YHR040W YML003WP0CF16 290 aa3.26□□□□□ -1.89
BCD1YHR040W REV1P12689 985 aa3.26□□□□□ -1.89
BCD1YHR040W CBS2P14905 389 aa3.26□□□□□ -1.89
BCD1YHR040W SGV1P23293 657 aaKnown RBP3.26□□□□□ -1.89
BCD1YHR040W PRP28P23394 588 aa3.26□□□□□ -1.89
BCD1YHR040W PPZ1P26570 692 aa3.26□□□□□ -1.89
BCD1YHR040W ERV1P27882 189 aa3.26□□□□□ -1.89
BCD1YHR040W NUP2P32499 720 aa3.26□□□□□ -1.89
BCD1YHR040W CYS4P32582 507 aaKnown RBP3.26□□□□□ -1.89
BCD1YHR040W SSO1P32867 290 aa3.26□□□□□ -1.89
BCD1YHR040W ATO2P32907 282 aa3.26□□□□□ -1.89
BCD1YHR040W SEC66P33754 206 aa3.26□□□□□ -1.89
BCD1YHR040W HCS1P34243 683 aa3.26□□□□□ -1.89
BCD1YHR040W CMC1P36064 111 aa3.26□□□□□ -1.89
BCD1YHR040W NTR2P36118 322 aaPredicted RBP3.26□□□□□ -1.89
BCD1YHR040W IML3P38265 245 aa3.26□□□□□ -1.89
BCD1YHR040W RCK1P38622 512 aa3.26□□□□□ -1.89
BCD1YHR040W PCL5P38794 229 aa3.26□□□□□ -1.89
BCD1YHR040W YHR127WP38833 243 aaKnown RBP3.26□□□□□ -1.89
BCD1YHR040W MTW1P39731 289 aa3.26□□□□□ -1.89
BCD1YHR040W RTT105P40063 208 aa3.26□□□□□ -1.89
BCD1YHR040W PIG2P40187 538 aa3.26□□□□□ -1.89
BCD1YHR040W OSW5P40219 148 aa3.26□□□□□ -1.89
BCD1YHR040W YRB2P40517 327 aa3.26□□□□□ -1.89
BCD1YHR040W NAS2P40555 220 aa3.26□□□□□ -1.89
BCD1YHR040W BIR1P47134 954 aa3.26□□□□□ -1.89
BCD1YHR040W MUP1P50276 574 aa3.26□□□□□ -1.89
BCD1YHR040W MRK1P50873 501 aa3.26□□□□□ -1.89
BCD1YHR040W SDT1P53078 280 aa3.26□□□□□ -1.89
BCD1YHR040W YGR015CP53208 328 aa3.26□□□□□ -1.89
BCD1YHR040W MTL1P53214 551 aa3.26□□□□□ -1.89
BCD1YHR040W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
BCD1YHR040W PNG1Q02890 363 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms