RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	SEC17	P32602	292 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YPT7	P32939	208 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	MSN2	P33748	704 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	APM3	P38153	483 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YHR202W	P38887	602 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
XKS1	YGR194C	FMP52	P40008	231 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	PRE6	P40303	254 aa	Known RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	PAN6	P40459	309 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	FMC1	P40491	155 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	AIM22	P47051	409 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YAE1	P47118	141 aa	Predicted RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	EAF6	P47128	113 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	HMS2	P47175	358 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	PYK2	P52489	506 aa	Known RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	POP6	P53218	158 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	MPS1	P54199	764 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	HXT11	P54862	567 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	PRM15	Q03262	622 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YMR087W	Q04299	284 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YMR321C	Q04898	105 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	GRX8	Q05926	109 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	VPS74	Q06385	345 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	RAD34	Q06665	692 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	CLP1	Q08685	445 aa	Predicted RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	SIA1	Q12212	622 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YBR182C-A	Q8TGU6	64 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	CTT1	P06115	562 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	SPT3	P06844	337 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	RPC40	P07703	335 aa	Known RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	FUM1	P08417	488 aa	Known RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	ARO3	P14843	370 aa	Known RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	GLN3	P18494	730 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	DCC1	P25559	380 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	PGS1	P25578	521 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	HOM6	P31116	359 aa	Known RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	OAC1	P32332	324 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	MF(ALPHA)2	P32435	120 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	MRPL36	P36531	177 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YBR063C	P38083	404 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YHR035W	P38769	630 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	RPP1	P38786	293 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	AIM10	P39965	576 aa	Known RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	LSM5	P40089	93 aa	Known RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	YFL052W	P43551	465 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	PMT4	P46971	762 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	TIS11	P47977	285 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	NBP35	P52920	328 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	ERV25	P54837	211 aa	Known RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	IRC15	Q02733	499 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	TDA1	Q03533	586 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YMR130W	Q04223	302 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	HRD3	Q05787	833 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	NNT1	Q05874	261 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	BUR2	Q05949	395 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YPR172W	Q06608	200 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YEH1	Q07804	573 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	YTM1	Q12024	460 aa	Predicted RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	NMD4	Q12129	218 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
XKS1	YGR194C	YOR012W	Q12351	137 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	MAS2	P11914	482 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	LAT1	P12695	482 aa	Known RBP	4.1	□□□□□ -1.75
XKS1	YGR194C	FUS3	P16892	353 aa	Known RBP	4.1	□□□□□ -1.75
XKS1	YGR194C	PRP2	P20095	876 aa	Predicted RBP	4.1	□□□□□ -1.75
XKS1	YGR194C	RPS1B	P23248	255 aa	Known RBP	4.1	□□□□□ -1.75
XKS1	YGR194C	YCK1	P23291	538 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	ACB1	P31787	87 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	PET127	P32606	800 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	COS111	P38308	924 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	RTT105	P40063	208 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	ALG8	P40351	577 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	GDS1	P41913	522 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	DLD2	P46681	530 aa	Known RBP	4.1	□□□□□ -1.75
XKS1	YGR194C	YGR026W	P53217	278 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	BRE5	P53741	515 aa	Known RBP	4.1	□□□□□ -1.75
XKS1	YGR194C	BNA7	Q04066	261 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	AIM32	Q04689	311 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	RRT8	Q08219	342 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	FRE5	Q08908	694 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	YOR283W	Q12040	230 aa	Known RBP	4.1	□□□□□ -1.75
XKS1	YGR194C	YRM1	Q12340	786 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	SFG1	Q12507	346 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	CSR2	Q12734	1121 aa		4.1	□□□□□ -1.75
XKS1	YGR194C	GAL1	P04385	528 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	MET8	P15807	274 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	PET9	P18239	318 aa	Known RBP	4.09	□□□□□ -1.75
XKS1	YGR194C	RNA14	P25298	677 aa	Known RBP	4.09	□□□□□ -1.75
XKS1	YGR194C	RBK1	P25332	333 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	TIM23	P32897	222 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	VAM7	P32912	316 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	ALY1	P36117	915 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	YCR087C-A	P37263	153 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	YMR144W	P40214	342 aa	Known RBP	4.09	□□□□□ -1.75
XKS1	YGR194C	TES1	P41903	349 aa	Known RBP	4.09	□□□□□ -1.75
XKS1	YGR194C	SSU1	P41930	458 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	SNG1	P46950	547 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	PET130	P47065	347 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	BFA1	P47113	574 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	VPS73	P53142	486 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms