RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A RPS16AP0CX51 143 aaKnown RBP2.34□□□□□ -2.03
YGR109W-AYGR109W-A RPS16BP0CX52 143 aaKnown RBP2.34□□□□□ -2.03
YGR109W-AYGR109W-A UBA1P22515 1024 aaKnown RBP2.34□□□□□ -2.03
YGR109W-AYGR109W-A MSK1P32048 576 aa2.34□□□□□ -2.03
YGR109W-AYGR109W-A FMT1P32785 401 aa2.34□□□□□ -2.03
YGR109W-AYGR109W-A LYS12P40495 371 aaKnown RBP2.34□□□□□ -2.03
YGR109W-AYGR109W-A HST1P53685 503 aa2.34□□□□□ -2.03
YGR109W-AYGR109W-A UTP6Q02354 440 aaKnown RBP2.34□□□□□ -2.03
YGR109W-AYGR109W-A RPL21AQ02753 160 aaKnown RBP2.34□□□□□ -2.03
YGR109W-AYGR109W-A RCF1Q03713 159 aa2.34□□□□□ -2.03
YGR109W-AYGR109W-A YLR177WQ06251 628 aa2.34□□□□□ -2.03
YGR109W-AYGR109W-A SHS1Q07657 551 aa2.34□□□□□ -2.03
YGR109W-AYGR109W-A NFI1Q12216 726 aa2.34□□□□□ -2.03
YGR109W-AYGR109W-A SKS1Q12505 502 aa2.34□□□□□ -2.03
YGR109W-AYGR109W-A RPL21BQ12672 160 aaKnown RBP2.34□□□□□ -2.03
YGR109W-AYGR109W-A TFB5Q3E7C1 72 aaPredicted RBP2.34□□□□□ -2.03
YGR109W-AYGR109W-A HSP82P02829 709 aaKnown RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A HEM4P06174 275 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A RPS14AP06367 137 aaKnown RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A RPL23AP0CX41 137 aaKnown RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A RPL23BP0CX42 137 aaKnown RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A MRPL8P22353 238 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A MSP1P28737 362 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A PDC2P32896 925 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A LAS1P36146 502 aaPredicted RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A LSM12P38828 187 aaKnown RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A RPS14BP39516 138 aaKnown RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A YER184CP39961 794 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A SNL1P40548 159 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A PFS2P42841 465 aaKnown RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A AIP1P46680 615 aaKnown RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A VHT1P53241 593 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A EOS1P53938 366 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A ATP16Q12165 160 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A RFM1Q12192 310 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A AIM45Q12480 344 aaKnown RBP2.33□□□□□ -2.04
YGR109W-AYGR109W-A FSH3Q99369 266 aa2.33□□□□□ -2.04
YGR109W-AYGR109W-A STE7P06784 515 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A RPL16AP26784 199 aaKnown RBP2.32□□□□□ -2.04
YGR109W-AYGR109W-A PMT2P31382 759 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A VAM7P32912 316 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A DAD2P36162 133 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A YBL028CP38202 106 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A CHL4P38907 458 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A IGO1P53897 168 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A YDR115WQ04598 105 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A FSH2Q05015 223 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A YOL075CQ08234 1294 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A YDL109CQ12103 647 aa2.32□□□□□ -2.04
YGR109W-AYGR109W-A TPI1P00942 248 aaKnown RBP2.31□□□□□ -2.04
YGR109W-AYGR109W-A MAS2P11914 482 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A PUT4P15380 627 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A CKI1P20485 582 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A FAR1P21268 830 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A GRR1P24814 1151 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A POT1P27796 417 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
YGR109W-AYGR109W-A SSE1P32589 693 aaKnown RBP2.31□□□□□ -2.04
YGR109W-AYGR109W-A TOA1P32773 286 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A ATG7P38862 630 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A LCP5P40079 357 aaPredicted RBP2.31□□□□□ -2.04
YGR109W-AYGR109W-A YMR010WQ03687 405 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A SLM3Q12093 417 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A SFM1Q12314 213 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A HMS1Q12398 434 aa2.31□□□□□ -2.04
YGR109W-AYGR109W-A STE3P06783 470 aa2.3□□□□□ -2.04
YGR109W-AYGR109W-A UNG1P12887 359 aa2.3□□□□□ -2.04
YGR109W-AYGR109W-A SAG1P20840 650 aa2.3□□□□□ -2.04
YGR109W-AYGR109W-A PHO84P25297 587 aaKnown RBP2.3□□□□□ -2.04
YGR109W-AYGR109W-A RDS1P25611 832 aa2.3□□□□□ -2.04
YGR109W-AYGR109W-A SOL2P37262 315 aa2.3□□□□□ -2.04
YGR109W-AYGR109W-A YJR030CP47101 745 aa2.3□□□□□ -2.04
YGR109W-AYGR109W-A CDH1P53197 566 aa2.3□□□□□ -2.04
YGR109W-AYGR109W-A YNL143CP53908 130 aa2.3□□□□□ -2.04
YGR109W-AYGR109W-A SMP3Q04174 516 aa2.3□□□□□ -2.04
YGR109W-AYGR109W-A TIR4Q12218 487 aaPredicted RBP2.3□□□□□ -2.04
YGR109W-AYGR109W-A TPS2P31688 896 aaKnown RBP2.29□□□□□ -2.04
YGR109W-AYGR109W-A EFB1P32471 206 aaKnown RBP2.29□□□□□ -2.04
YGR109W-AYGR109W-A SMP1P38128 452 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A YBR241CP38142 488 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A SIF2P38262 535 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A APE4P38821 490 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A PEX22P39718 180 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A BIO3P50277 480 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A MPS2P53159 387 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A YGR015CP53208 328 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A GAS2Q06135 555 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A DBP9Q06218 594 aaKnown RBP2.29□□□□□ -2.04
YGR109W-AYGR109W-A FRE8Q12209 686 aa2.29□□□□□ -2.04
YGR109W-AYGR109W-A MAS1P10507 462 aa2.28□□□□□ -2.04
YGR109W-AYGR109W-A THR4P16120 514 aaKnown RBP2.28□□□□□ -2.04
YGR109W-AYGR109W-A MIR1P23641 311 aaKnown RBP2.28□□□□□ -2.04
YGR109W-AYGR109W-A MXR2P25566 168 aa2.28□□□□□ -2.04
YGR109W-AYGR109W-A LDS1P31379 325 aa2.28□□□□□ -2.04
YGR109W-AYGR109W-A SWI3P32591 825 aa2.28□□□□□ -2.04
YGR109W-AYGR109W-A MRPS5P33759 307 aa2.28□□□□□ -2.04
YGR109W-AYGR109W-A GDT1P38301 280 aaPredicted RBP2.28□□□□□ -2.04
YGR109W-AYGR109W-A YHR182WP38870 785 aa2.28□□□□□ -2.04
YGR109W-AYGR109W-A RPA34P47006 233 aaPredicted RBP2.28□□□□□ -2.04
YGR109W-AYGR109W-A YJR054WP47114 497 aa2.28□□□□□ -2.04
YGR109W-AYGR109W-A EFM3P47163 339 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms