RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C YML108WQ03759 105 aa3.04□□□□□ -1.92
XRN1YGL173C GIM5Q04493 163 aa3.04□□□□□ -1.92
XRN1YGL173C HPF1Q05164 967 aa3.04□□□□□ -1.92
XRN1YGL173C VPS74Q06385 345 aa3.04□□□□□ -1.92
XRN1YGL173C RRP12Q12754 1228 aaKnown RBP3.04□□□□□ -1.92
XRN1YGL173C STE3P06783 470 aa3.04□□□□□ -1.92
XRN1YGL173C GDH1P07262 454 aaKnown RBP3.04□□□□□ -1.92
XRN1YGL173C RPC34P32910 317 aa3.04□□□□□ -1.92
XRN1YGL173C NUF2P33895 451 aa3.04□□□□□ -1.92
XRN1YGL173C DBP7P36120 742 aaKnown RBP3.04□□□□□ -1.92
XRN1YGL173C PRS2P38620 318 aaKnown RBP3.04□□□□□ -1.92
XRN1YGL173C PRP39P39682 629 aaKnown RBP3.04□□□□□ -1.92
XRN1YGL173C SNZ3P43545 298 aa3.04□□□□□ -1.92
XRN1YGL173C GUF1P46943 645 aa3.04□□□□□ -1.92
XRN1YGL173C TAX4P47030 604 aa3.04□□□□□ -1.92
XRN1YGL173C SNZ2P53824 298 aa3.04□□□□□ -1.92
XRN1YGL173C ESBP6P53918 673 aa3.04□□□□□ -1.92
XRN1YGL173C PGK1P00560 416 aaKnown RBP3.03□□□□□ -1.92
XRN1YGL173C ADE17P38009 592 aaKnown RBP3.03□□□□□ -1.92
XRN1YGL173C YNL195CP40168 261 aa3.03□□□□□ -1.92
XRN1YGL173C NDC80P40460 691 aa3.03□□□□□ -1.92
XRN1YGL173C CFD1P40558 293 aa3.03□□□□□ -1.92
XRN1YGL173C ODC1Q03028 310 aa3.03□□□□□ -1.92
XRN1YGL173C BSP1Q06604 576 aa3.03□□□□□ -1.92
XRN1YGL173C YDL144CQ07589 356 aa3.03□□□□□ -1.92
XRN1YGL173C PDE2P06776 526 aa3.03□□□□□ -1.92
XRN1YGL173C CHO1P08456 276 aa3.03□□□□□ -1.92
XRN1YGL173C RPL3P14126 387 aaKnown RBP3.03□□□□□ -1.92
XRN1YGL173C RPB5P20434 215 aa3.03□□□□□ -1.92
XRN1YGL173C GAR1P28007 205 aaKnown RBP3.03□□□□□ -1.92
XRN1YGL173C MAK5P38112 773 aaPredicted RBP3.03□□□□□ -1.92
XRN1YGL173C YHI9P38765 294 aa3.03□□□□□ -1.92
XRN1YGL173C EXO1P39875 702 aa3.03□□□□□ -1.92
XRN1YGL173C DIA1P54005 336 aa3.03□□□□□ -1.92
XRN1YGL173C YPR022CQ12139 1133 aa3.03□□□□□ -1.92
XRN1YGL173C RNR3P21672 869 aaKnown RBP3.03□□□□□ -1.92
XRN1YGL173C IFM1P25038 676 aa3.03□□□□□ -1.92
XRN1YGL173C COQ2P32378 372 aa3.03□□□□□ -1.92
XRN1YGL173C MCH2P36032 473 aa3.03□□□□□ -1.92
XRN1YGL173C URA8P38627 578 aaPredicted RBP3.03□□□□□ -1.92
XRN1YGL173C ORC5P50874 479 aa3.03□□□□□ -1.92
XRN1YGL173C LCL3P53153 274 aa3.03□□□□□ -1.92
XRN1YGL173C IRC4Q03036 179 aa3.03□□□□□ -1.92
XRN1YGL173C RIM13Q03792 727 aa3.03□□□□□ -1.92
XRN1YGL173C YMR087WQ04299 284 aa3.03□□□□□ -1.92
XRN1YGL173C EMI2Q04409 500 aaKnown RBP3.03□□□□□ -1.92
XRN1YGL173C CDC123Q05791 360 aa3.03□□□□□ -1.92
XRN1YGL173C MHR1Q06630 226 aa3.03□□□□□ -1.92
XRN1YGL173C GEP3Q08622 556 aa3.03□□□□□ -1.92
XRN1YGL173C PRP46Q12417 451 aaPredicted RBP3.03□□□□□ -1.92
XRN1YGL173C FUS3P16892 353 aaKnown RBP3.03□□□□□ -1.92
XRN1YGL173C EST1P17214 699 aaPredicted RBP3.03□□□□□ -1.92
XRN1YGL173C HXT1P32465 570 aa3.03□□□□□ -1.92
XRN1YGL173C MSN4P33749 630 aa3.03□□□□□ -1.92
XRN1YGL173C YKL187CP34231 750 aa3.03□□□□□ -1.92
XRN1YGL173C RIM2P38127 377 aa3.03□□□□□ -1.92
XRN1YGL173C YNL146WP53906 100 aa3.03□□□□□ -1.92
XRN1YGL173C SPP2Q02521 185 aa3.03□□□□□ -1.92
XRN1YGL173C GRS2Q06817 618 aa3.03□□□□□ -1.92
XRN1YGL173C UBA3Q99344 299 aa3.03□□□□□ -1.92
XRN1YGL173C NFT1P0CE68 1218 aa3.02□□□□□ -1.93
XRN1YGL173C COQ1P18900 473 aa3.02□□□□□ -1.93
XRN1YGL173C BUB3P26449 341 aa3.02□□□□□ -1.93
XRN1YGL173C YEF1P32622 495 aa3.02□□□□□ -1.93
XRN1YGL173C SYG1P40528 902 aa3.02□□□□□ -1.93
XRN1YGL173C AGP3P43548 558 aa3.02□□□□□ -1.93
XRN1YGL173C ERP1Q05359 219 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C PEX27Q08580 376 aa3.02□□□□□ -1.93
XRN1YGL173C TPS2P31688 896 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C MGM101P32787 269 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C YSC83P32792 385 aa3.02□□□□□ -1.93
XRN1YGL173C FET3P38993 636 aa3.02□□□□□ -1.93
XRN1YGL173C ASG7P46993 209 aa3.02□□□□□ -1.93
XRN1YGL173C IBD2P53892 351 aa3.02□□□□□ -1.93
XRN1YGL173C PKH2Q12236 1081 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C LSO2Q3E772 92 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C ATR1P13090 542 aa3.02□□□□□ -1.93
XRN1YGL173C TKL1P23254 680 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C RPC19P28000 142 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C CYS4P32582 507 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C GDA1P32621 518 aa3.02□□□□□ -1.93
XRN1YGL173C PTR2P32901 601 aa3.02□□□□□ -1.93
XRN1YGL173C RSM22P36056 628 aa3.02□□□□□ -1.93
XRN1YGL173C FAD1P38913 306 aa3.02□□□□□ -1.93
XRN1YGL173C TRS85P46944 698 aa3.02□□□□□ -1.93
XRN1YGL173C BNA3P47039 444 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C YGR035CP53222 116 aa3.02□□□□□ -1.93
XRN1YGL173C GPI1P53306 609 aa3.02□□□□□ -1.93
XRN1YGL173C NRD1P53617 575 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
XRN1YGL173C DUG3P53871 357 aa3.02□□□□□ -1.93
XRN1YGL173C SLT2Q00772 484 aa3.02□□□□□ -1.93
XRN1YGL173C LDS2Q08218 356 aa3.02□□□□□ -1.93
XRN1YGL173C MCH4Q08268 501 aa3.02□□□□□ -1.93
XRN1YGL173C MUM3Q08750 479 aa3.02□□□□□ -1.93
XRN1YGL173C YDL009CQ12210 107 aa3.02□□□□□ -1.93
XRN1YGL173C YPR053CQ6Q5F3 151 aa3.02□□□□□ -1.93
XRN1YGL173C LOS1P33418 1100 aaPredicted RBP3.02□□□□□ -1.93
XRN1YGL173C SOR1P35497 357 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C CCT4P39078 528 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C YFL015CP43578 164 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms