RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C MCT1Q12283 360 aa3.79□□□□□ -1.8
SCL1YGL011C GLE1Q12315 538 aa3.79□□□□□ -1.8
SCL1YGL011C RPS18AP0CX55 146 aaKnown RBP3.78□□□□□ -1.8
SCL1YGL011C RPS18BP0CX56 146 aaPredicted RBP3.78□□□□□ -1.8
SCL1YGL011C CDC50P25656 391 aa3.78□□□□□ -1.8
SCL1YGL011C RPL16AP26784 199 aaKnown RBP3.78□□□□□ -1.8
SCL1YGL011C UTH1P36135 365 aa3.78□□□□□ -1.8
SCL1YGL011C OM14P38325 134 aa3.78□□□□□ -1.8
SCL1YGL011C ATG7P38862 630 aa3.78□□□□□ -1.8
SCL1YGL011C HAL1Q01766 294 aa3.78□□□□□ -1.8
SCL1YGL011C TSA2Q04120 196 aa3.78□□□□□ -1.8
SCL1YGL011C HXT2P23585 541 aa3.77□□□□□ -1.81
SCL1YGL011C YHR122WP38829 231 aa3.77□□□□□ -1.81
SCL1YGL011C YHR182WP38870 785 aa3.77□□□□□ -1.81
SCL1YGL011C YJR030CP47101 745 aa3.77□□□□□ -1.81
SCL1YGL011C SHE4P51534 789 aa3.77□□□□□ -1.81
SCL1YGL011C ARR1Q06596 294 aa3.77□□□□□ -1.81
SCL1YGL011C YOL075CQ08234 1294 aa3.77□□□□□ -1.81
SCL1YGL011C YDL109CQ12103 647 aa3.77□□□□□ -1.81
SCL1YGL011C PRB1P09232 635 aa3.76□□□□□ -1.81
SCL1YGL011C TRX1P22217 103 aaKnown RBP3.76□□□□□ -1.81
SCL1YGL011C IES6P32617 166 aa3.76□□□□□ -1.81
SCL1YGL011C AIP1P46680 615 aaKnown RBP3.76□□□□□ -1.81
SCL1YGL011C YHC3P47040 408 aa3.76□□□□□ -1.81
SCL1YGL011C LST7P53237 242 aa3.76□□□□□ -1.81
SCL1YGL011C YMR010WQ03687 405 aa3.76□□□□□ -1.81
SCL1YGL011C MSC3Q05812 728 aa3.76□□□□□ -1.81
SCL1YGL011C HEM4P06174 275 aa3.75□□□□□ -1.81
SCL1YGL011C VMA2P16140 517 aaKnown RBP3.75□□□□□ -1.81
SCL1YGL011C MXR2P25566 168 aa3.75□□□□□ -1.81
SCL1YGL011C MRPS5P33759 307 aa3.75□□□□□ -1.81
SCL1YGL011C YPT35P38815 214 aaKnown RBP3.75□□□□□ -1.81
SCL1YGL011C LSM12P38828 187 aaKnown RBP3.75□□□□□ -1.81
SCL1YGL011C ALP1P38971 573 aa3.75□□□□□ -1.81
SCL1YGL011C HST1P53685 503 aa3.75□□□□□ -1.81
SCL1YGL011C VAC7P53950 1165 aa3.75□□□□□ -1.81
SCL1YGL011C ENT5Q03769 411 aaKnown RBP3.75□□□□□ -1.81
SCL1YGL011C RRB1Q04225 511 aaKnown RBP3.75□□□□□ -1.81
SCL1YGL011C NAT4Q04751 285 aa3.75□□□□□ -1.81
SCL1YGL011C APC5Q08683 685 aa3.75□□□□□ -1.81
SCL1YGL011C HMS1Q12398 434 aa3.75□□□□□ -1.81
SCL1YGL011C SPO24Q3E752 67 aa3.75□□□□□ -1.81
SCL1YGL011C COX4P04037 155 aa3.74□□□□□ -1.81
SCL1YGL011C RPL23AP0CX41 137 aaKnown RBP3.74□□□□□ -1.81
SCL1YGL011C RPL23BP0CX42 137 aaKnown RBP3.74□□□□□ -1.81
SCL1YGL011C HSP26P15992 214 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
SCL1YGL011C ZRC1P20107 442 aa3.74□□□□□ -1.81
SCL1YGL011C CMK2P22517 447 aa3.74□□□□□ -1.81
SCL1YGL011C GIT1P25346 518 aa3.74□□□□□ -1.81
SCL1YGL011C KRR1P25586 316 aaPredicted RBP3.74□□□□□ -1.81
SCL1YGL011C PGU1P47180 361 aa3.74□□□□□ -1.81
SCL1YGL011C PRP38Q00723 242 aaPredicted RBP3.74□□□□□ -1.81
SCL1YGL011C SPH1Q06160 661 aa3.74□□□□□ -1.81
SCL1YGL011C ATP16Q12165 160 aa3.74□□□□□ -1.81
SCL1YGL011C SOD1P00445 154 aaKnown RBP3.73□□□□□ -1.81
SCL1YGL011C RPS14AP06367 137 aaKnown RBP3.73□□□□□ -1.81
SCL1YGL011C UTR1P21373 530 aa3.73□□□□□ -1.81
SCL1YGL011C IST2P38250 946 aa3.73□□□□□ -1.81
SCL1YGL011C RPS14BP39516 138 aaKnown RBP3.73□□□□□ -1.81
SCL1YGL011C SLM3Q12093 417 aa3.73□□□□□ -1.81
SCL1YGL011C WSC4P38739 605 aa3.72□□□□□ -1.81
SCL1YGL011C LIN1P38852 340 aaPredicted RBP3.72□□□□□ -1.81
SCL1YGL011C PRP39P39682 629 aaKnown RBP3.72□□□□□ -1.81
SCL1YGL011C ALD5P40047 520 aaKnown RBP3.72□□□□□ -1.81
SCL1YGL011C IGD1P43598 195 aa3.72□□□□□ -1.81
SCL1YGL011C CSM3Q04659 317 aa3.72□□□□□ -1.81
SCL1YGL011C FSH2Q05015 223 aa3.72□□□□□ -1.81
SCL1YGL011C DNL4Q08387 944 aaPredicted RBP3.72□□□□□ -1.81
SCL1YGL011C YOR376WQ08900 122 aa3.72□□□□□ -1.81
SCL1YGL011C SFM1Q12314 213 aa3.72□□□□□ -1.81
SCL1YGL011C UBA3Q99344 299 aa3.72□□□□□ -1.81
SCL1YGL011C RAD1P06777 1100 aa3.71□□□□□ -1.82
SCL1YGL011C YLL053CP0CD98 152 aa3.71□□□□□ -1.82
SCL1YGL011C ARF2P19146 181 aaKnown RBP3.71□□□□□ -1.82
SCL1YGL011C MIR1P23641 311 aaKnown RBP3.71□□□□□ -1.82
SCL1YGL011C CIN8P27895 1000 aa3.71□□□□□ -1.82
SCL1YGL011C PMT2P31382 759 aa3.71□□□□□ -1.82
SCL1YGL011C DEP1P31385 405 aa3.71□□□□□ -1.82
SCL1YGL011C YKR015CP36111 568 aa3.71□□□□□ -1.82
SCL1YGL011C POP2P39008 433 aa3.71□□□□□ -1.82
SCL1YGL011C RBG1P39729 369 aa3.71□□□□□ -1.82
SCL1YGL011C YCH1P42937 148 aa3.71□□□□□ -1.82
SCL1YGL011C SEH1P53011 349 aaKnown RBP3.71□□□□□ -1.82
SCL1YGL011C YGL114WP53134 725 aa3.71□□□□□ -1.82
SCL1YGL011C CWC22P53333 577 aaKnown RBP3.71□□□□□ -1.82
SCL1YGL011C YNL146WP53906 100 aa3.71□□□□□ -1.82
SCL1YGL011C MRPS16Q02608 121 aa3.71□□□□□ -1.82
SCL1YGL011C YLR177WQ06251 628 aa3.71□□□□□ -1.82
SCL1YGL011C STE7P06784 515 aa3.7□□□□□ -1.82
SCL1YGL011C MKK1P32490 508 aa3.7□□□□□ -1.82
SCL1YGL011C TRM82Q03774 444 aa3.7□□□□□ -1.82
SCL1YGL011C REX3Q12090 404 aa3.7□□□□□ -1.82
SCL1YGL011C FRE8Q12209 686 aa3.7□□□□□ -1.82
SCL1YGL011C UNG1P12887 359 aa3.69□□□□□ -1.82
SCL1YGL011C PRS1P32895 427 aaKnown RBP3.69□□□□□ -1.82
SCL1YGL011C SRB2P34162 210 aa3.69□□□□□ -1.82
SCL1YGL011C SOL2P37262 315 aa3.69□□□□□ -1.82
SCL1YGL011C GPI18P38211 433 aa3.69□□□□□ -1.82
SCL1YGL011C PEX32P38292 413 aa3.69□□□□□ -1.82
SCL1YGL011C YMR134WP40207 237 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms