RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W MMS21P38632 267 aa4.54□□□□□ -1.68
UBC6YER100W SBE22P38814 852 aa4.54□□□□□ -1.68
UBC6YER100W YGL242CP53066 181 aa4.54□□□□□ -1.68
UBC6YER100W OKP1P53298 406 aa4.54□□□□□ -1.68
UBC6YER100W BIO4P53630 237 aa4.54□□□□□ -1.68
UBC6YER100W HXT11P54862 567 aa4.54□□□□□ -1.68
UBC6YER100W SRL4Q03085 281 aa4.54□□□□□ -1.68
UBC6YER100W CSM3Q04659 317 aa4.54□□□□□ -1.68
UBC6YER100W LOT6Q07923 191 aa4.54□□□□□ -1.68
UBC6YER100W GAT3Q07928 141 aa4.54□□□□□ -1.68
UBC6YER100W SLF1Q12034 447 aaKnown RBP4.54□□□□□ -1.68
UBC6YER100W TY3A-GQ12173 290 aa4.54□□□□□ -1.68
UBC6YER100W AYT1Q12226 474 aa4.54□□□□□ -1.68
UBC6YER100W TY3A-IQ99219 290 aa4.54□□□□□ -1.68
UBC6YER100W RPL15AP05748 204 aaKnown RBP4.53□□□□□ -1.68
UBC6YER100W DEG1P31115 442 aaKnown RBP4.53□□□□□ -1.68
UBC6YER100W MKK1P32490 508 aa4.53□□□□□ -1.68
UBC6YER100W MUD1P32605 298 aaKnown RBP4.53□□□□□ -1.68
UBC6YER100W YHK8P38776 514 aa4.53□□□□□ -1.68
UBC6YER100W RPR2P40571 144 aa4.53□□□□□ -1.68
UBC6YER100W YAR1P46683 200 aa4.53□□□□□ -1.68
UBC6YER100W TRF5P48561 642 aaKnown RBP4.53□□□□□ -1.68
UBC6YER100W KAP114P53067 1004 aa4.53□□□□□ -1.68
UBC6YER100W PXR1P53335 271 aaPredicted RBP4.53□□□□□ -1.68
UBC6YER100W TRM112P53738 135 aaPredicted RBP4.53□□□□□ -1.68
UBC6YER100W YMR102CQ03177 834 aa4.53□□□□□ -1.68
UBC6YER100W TLG1Q03322 224 aa4.53□□□□□ -1.68
UBC6YER100W YLR108CQ12259 485 aa4.53□□□□□ -1.68
UBC6YER100W RBD2Q12270 262 aa4.53□□□□□ -1.68
UBC6YER100W RGT2Q12300 763 aa4.53□□□□□ -1.68
UBC6YER100W AHC1Q12433 566 aa4.53□□□□□ -1.68
UBC6YER100W DET1Q99288 334 aaKnown RBP4.53□□□□□ -1.68
UBC6YER100W MSF1P08425 469 aa4.52□□□□□ -1.69
UBC6YER100W ICL1P28240 557 aaPredicted RBP4.52□□□□□ -1.69
UBC6YER100W RAD5P32849 1169 aaPredicted RBP4.52□□□□□ -1.69
UBC6YER100W NAT2P37293 288 aa4.52□□□□□ -1.69
UBC6YER100W MTC6P38849 526 aa4.52□□□□□ -1.69
UBC6YER100W COX14P39103 70 aa4.52□□□□□ -1.69
UBC6YER100W YND1P40009 630 aa4.52□□□□□ -1.69
UBC6YER100W OST1P41543 476 aaKnown RBP4.52□□□□□ -1.69
UBC6YER100W YCH1P42937 148 aa4.52□□□□□ -1.69
UBC6YER100W KEL2P50090 882 aa4.52□□□□□ -1.69
UBC6YER100W COS10P52924 374 aa4.52□□□□□ -1.69
UBC6YER100W DIG1Q03063 452 aaKnown RBP4.52□□□□□ -1.69
UBC6YER100W PRM6Q04705 352 aa4.52□□□□□ -1.69
UBC6YER100W GPN3Q06543 272 aa4.52□□□□□ -1.69
UBC6YER100W SAM4Q08985 325 aaKnown RBP4.52□□□□□ -1.69
UBC6YER100W PRP46Q12417 451 aaPredicted RBP4.52□□□□□ -1.69
UBC6YER100W PET123P17558 318 aa4.51□□□□□ -1.69
UBC6YER100W PTP1P25044 335 aa4.51□□□□□ -1.69
UBC6YER100W SEC1P30619 724 aaKnown RBP4.51□□□□□ -1.69
UBC6YER100W GCG1P32656 232 aaKnown RBP4.51□□□□□ -1.69
UBC6YER100W HIS2P38635 335 aa4.51□□□□□ -1.69
UBC6YER100W RPH1P39956 796 aa4.51□□□□□ -1.69
UBC6YER100W YIL169CP40442 995 aa4.51□□□□□ -1.69
UBC6YER100W TES1P41903 349 aaKnown RBP4.51□□□□□ -1.69
UBC6YER100W SPP2Q02521 185 aa4.51□□□□□ -1.69
UBC6YER100W GMC2Q06201 188 aa4.51□□□□□ -1.69
UBC6YER100W UBA3Q99344 299 aa4.51□□□□□ -1.69
UBC6YER100W YCR043CP25361 127 aa4.5□□□□□ -1.69
UBC6YER100W CSM1P25651 190 aa4.5□□□□□ -1.69
UBC6YER100W PEX2P32800 271 aa4.5□□□□□ -1.69
UBC6YER100W SKG6P32900 734 aaPredicted RBP4.5□□□□□ -1.69
UBC6YER100W DED81P38707 554 aaKnown RBP4.5□□□□□ -1.69
UBC6YER100W YPT35P38815 214 aaKnown RBP4.5□□□□□ -1.69
UBC6YER100W MET30P39014 640 aa4.5□□□□□ -1.69
UBC6YER100W FHL1P39521 936 aa4.5□□□□□ -1.69
UBC6YER100W DSE1P40077 573 aa4.5□□□□□ -1.69
UBC6YER100W FMC1P40491 155 aa4.5□□□□□ -1.69
UBC6YER100W YFL040WP43562 540 aa4.5□□□□□ -1.69
UBC6YER100W MRX5P47007 382 aa4.5□□□□□ -1.69
UBC6YER100W BIO3P50277 480 aa4.5□□□□□ -1.69
UBC6YER100W SCW4P53334 386 aaKnown RBP4.5□□□□□ -1.69
UBC6YER100W MNT4P53745 580 aa4.5□□□□□ -1.69
UBC6YER100W BER1Q06688 274 aaKnown RBP4.5□□□□□ -1.69
UBC6YER100W YDL114WQ07530 308 aa4.5□□□□□ -1.69
UBC6YER100W THP3Q12049 470 aaKnown RBP4.5□□□□□ -1.69
UBC6YER100W YOL107WQ12239 342 aa4.5□□□□□ -1.69
UBC6YER100W SET6Q12529 373 aa4.5□□□□□ -1.69
UBC6YER100W COX2P00410 251 aa4.49□□□□□ -1.69
UBC6YER100W ATP6P00854 259 aa4.49□□□□□ -1.69
UBC6YER100W PIS1P06197 220 aaKnown RBP4.49□□□□□ -1.69
UBC6YER100W RAD7P06779 565 aa4.49□□□□□ -1.69
UBC6YER100W ITR2P30606 609 aa4.49□□□□□ -1.69
UBC6YER100W YNL134CP53912 376 aaKnown RBP4.49□□□□□ -1.69
UBC6YER100W YMR027WQ04371 470 aa4.49□□□□□ -1.69
UBC6YER100W SRL1Q08673 210 aa4.49□□□□□ -1.69
UBC6YER100W YRM1Q12340 786 aa4.49□□□□□ -1.69
UBC6YER100W YCR024C-BQ3E7Z8 88 aa4.49□□□□□ -1.69
UBC6YER100W POL30P15873 258 aaKnown RBP4.48□□□□□ -1.69
UBC6YER100W HEM15P16622 393 aa4.48□□□□□ -1.69
UBC6YER100W HPR1P17629 752 aaKnown RBP4.48□□□□□ -1.69
UBC6YER100W RPB4P20433 221 aaPredicted RBP4.48□□□□□ -1.69
UBC6YER100W DPH5P32469 300 aaPredicted RBP4.48□□□□□ -1.69
UBC6YER100W COS9P36034 407 aa4.48□□□□□ -1.69
UBC6YER100W YHR035WP38769 630 aa4.48□□□□□ -1.69
UBC6YER100W PRM9P39551 298 aa4.48□□□□□ -1.69
UBC6YER100W AGP3P43548 558 aa4.48□□□□□ -1.69
UBC6YER100W AIM24P47127 394 aa4.48□□□□□ -1.69
UBC6YER100W MRM2P53123 320 aa4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms