RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C ISA2Q12425 185 aa2.02□□□□□ -2.09
SNU56YDR240C COS9P36034 407 aa2.01□□□□□ -2.09
SNU56YDR240C SHE1P38200 338 aa2.01□□□□□ -2.09
SNU56YDR240C SPO73P40031 143 aa2.01□□□□□ -2.09
SNU56YDR240C YGR015CP53208 328 aa2.01□□□□□ -2.09
SNU56YDR240C YDL109CQ12103 647 aa2.01□□□□□ -2.09
SNU56YDR240C ATP16Q12165 160 aa2.01□□□□□ -2.09
SNU56YDR240C MRPL8P22353 238 aa2.01□□□□□ -2.09
SNU56YDR240C AGA2P32781 87 aa2.01□□□□□ -2.09
SNU56YDR240C YBR241CP38142 488 aa2.01□□□□□ -2.09
SNU56YDR240C HEM14P40012 539 aa2.01□□□□□ -2.09
SNU56YDR240C BIO3P50277 480 aa2.01□□□□□ -2.09
SNU56YDR240C CKA2P19454 339 aa2□□□□□ -2.09
SNU56YDR240C FRM2P37261 193 aa2□□□□□ -2.09
SNU56YDR240C TRR2P38816 342 aa2□□□□□ -2.09
SNU56YDR240C RRT13P40042 185 aa2□□□□□ -2.09
SNU56YDR240C BUD27P43573 796 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SNU56YDR240C RPN14P53196 417 aa2□□□□□ -2.09
SNU56YDR240C RMI1Q02685 241 aa2□□□□□ -2.09
SNU56YDR240C RAD23P32628 398 aaKnown RBP1.99□□□□□ -2.09
SNU56YDR240C PTK1P36002 662 aaPredicted RBP1.99□□□□□ -2.09
SNU56YDR240C YKR015CP36111 568 aa1.99□□□□□ -2.09
SNU56YDR240C ZRG17P53735 605 aa1.99□□□□□ -2.09
SNU56YDR240C SED5Q01590 340 aa1.99□□□□□ -2.09
SNU56YDR240C VTI1Q04338 217 aa1.99□□□□□ -2.09
SNU56YDR240C MRX8Q05473 314 aa1.99□□□□□ -2.09
SNU56YDR240C YOR376WQ08900 122 aa1.99□□□□□ -2.09
SNU56YDR240C AUS1Q08409 1394 aa1.99□□□□□ -2.09
SNU56YDR240C RPL23AP0CX41 137 aaKnown RBP1.98□□□□□ -2.09
SNU56YDR240C RPL23BP0CX42 137 aaKnown RBP1.98□□□□□ -2.09
SNU56YDR240C FUS3P16892 353 aaKnown RBP1.98□□□□□ -2.09
SNU56YDR240C MIR1P23641 311 aaKnown RBP1.98□□□□□ -2.09
SNU56YDR240C AST1P35183 429 aa1.98□□□□□ -2.09
SNU56YDR240C CTK3P46963 296 aaPredicted RBP1.98□□□□□ -2.09
SNU56YDR240C MRX11Q03079 207 aa1.98□□□□□ -2.09
SNU56YDR240C INP2Q03824 705 aa1.98□□□□□ -2.09
SNU56YDR240C STE2D6VTK4 431 aa1.97□□□□□ -2.09
SNU56YDR240C KAP104P38217 918 aaKnown RBP1.97□□□□□ -2.09
SNU56YDR240C YJR054WP47114 497 aa1.97□□□□□ -2.09
SNU56YDR240C SLT2Q00772 484 aa1.97□□□□□ -2.09
SNU56YDR240C GAT3Q07928 141 aa1.97□□□□□ -2.09
SNU56YDR240C SRN2Q99176 213 aa1.97□□□□□ -2.09
SNU56YDR240C SSE1P32589 693 aaKnown RBP1.96□□□□□ -2.1
SNU56YDR240C DBP7P36120 742 aaKnown RBP1.96□□□□□ -2.1
SNU56YDR240C UFE1P41834 346 aa1.96□□□□□ -2.1
SNU56YDR240C AIM23P47015 356 aa1.96□□□□□ -2.1
SNU56YDR240C CIK1Q01649 594 aa1.96□□□□□ -2.1
SNU56YDR240C MEH1Q02205 184 aa1.96□□□□□ -2.1
SNU56YDR240C GAS2Q06135 555 aa1.96□□□□□ -2.1
SNU56YDR240C IPK1Q06667 281 aa1.96□□□□□ -2.1
SNU56YDR240C GPM3Q12326 303 aa1.96□□□□□ -2.1
SNU56YDR240C YAL067W-AQ8TGK6 75 aa1.96□□□□□ -2.1
SNU56YDR240C SRB2P34162 210 aa1.95□□□□□ -2.1
SNU56YDR240C RBG1P39729 369 aa1.95□□□□□ -2.1
SNU56YDR240C STB1P42845 420 aa1.95□□□□□ -2.1
SNU56YDR240C COS4P43542 379 aa1.95□□□□□ -2.1
SNU56YDR240C CDH1P53197 566 aa1.95□□□□□ -2.1
SNU56YDR240C TIP20P33891 701 aa1.94□□□□□ -2.1
SNU56YDR240C EFM1P38732 585 aa1.94□□□□□ -2.1
SNU56YDR240C GGC1P38988 300 aa1.94□□□□□ -2.1
SNU56YDR240C EFM3P47163 339 aa1.94□□□□□ -2.1
SNU56YDR240C API2Q04413 109 aa1.94□□□□□ -2.1
SNU56YDR240C APC4Q04601 652 aa1.94□□□□□ -2.1
SNU56YDR240C YLH47Q06493 454 aa1.94□□□□□ -2.1
SNU56YDR240C SHS1Q07657 551 aa1.94□□□□□ -2.1
SNU56YDR240C SKG6P32900 734 aaPredicted RBP1.94□□□□□ -2.1
SNU56YDR240C MNL1P38888 796 aa1.94□□□□□ -2.1
SNU56YDR240C SPE3Q12074 293 aaKnown RBP1.94□□□□□ -2.1
SNU56YDR240C YPR096CO13587 100 aa1.93□□□□□ -2.1
SNU56YDR240C PMT2P31382 759 aa1.93□□□□□ -2.1
SNU56YDR240C EFB1P32471 206 aaKnown RBP1.93□□□□□ -2.1
SNU56YDR240C VAM7P32912 316 aa1.93□□□□□ -2.1
SNU56YDR240C MLH1P38920 769 aa1.93□□□□□ -2.1
SNU56YDR240C YJL144WP47009 104 aa1.93□□□□□ -2.1
SNU56YDR240C FAR10Q06001 478 aa1.93□□□□□ -2.1
SNU56YDR240C HRT1Q08273 121 aa1.93□□□□□ -2.1
SNU56YDR240C RPL1AP0CX43 217 aaKnown RBP1.92□□□□□ -2.1
SNU56YDR240C RPL1BP0CX44 217 aaKnown RBP1.92□□□□□ -2.1
SNU56YDR240C PEX5P35056 612 aa1.92□□□□□ -2.1
SNU56YDR240C SRP72P38688 640 aaKnown RBP1.92□□□□□ -2.1
SNU56YDR240C YHR177WP38867 453 aa1.92□□□□□ -2.1
SNU56YDR240C YHR182WP38870 785 aa1.92□□□□□ -2.1
SNU56YDR240C YIL059CP40520 121 aa1.92□□□□□ -2.1
SNU56YDR240C NAS6P50086 228 aa1.92□□□□□ -2.1
SNU56YDR240C PRM1P53835 661 aa1.92□□□□□ -2.1
SNU56YDR240C RPN5Q12250 445 aaKnown RBP1.92□□□□□ -2.1
SNU56YDR240C BGL2P15703 313 aaKnown RBP1.91□□□□□ -2.1
SNU56YDR240C CBF5P33322 483 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SNU56YDR240C SPP381P38282 291 aaPredicted RBP1.91□□□□□ -2.1
SNU56YDR240C LYS12P40495 371 aaKnown RBP1.91□□□□□ -2.1
SNU56YDR240C MOB2P43563 287 aa1.91□□□□□ -2.1
SNU56YDR240C YML6P51998 286 aa1.91□□□□□ -2.1
SNU56YDR240C RET3P53600 189 aa1.91□□□□□ -2.1
SNU56YDR240C VPS9P54787 451 aa1.91□□□□□ -2.1
SNU56YDR240C GMC1Q04399 608 aa1.91□□□□□ -2.1
SNU56YDR240C YOL029CQ08187 201 aa1.91□□□□□ -2.1
SNU56YDR240C MMT2Q08970 484 aa1.91□□□□□ -2.1
SNU56YDR240C SMC6Q12749 1114 aa1.91□□□□□ -2.1
SNU56YDR240C UBA3Q99344 299 aa1.91□□□□□ -2.1
SNU56YDR240C ALE1Q08548 619 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms