RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W GIP2P40036 548 aa5.18□□□□□ -1.58
FOB1YDR110W BUR6P40096 142 aa5.18□□□□□ -1.58
FOB1YDR110W YIL108WP40483 696 aaKnown RBP5.18□□□□□ -1.58
FOB1YDR110W SLM1P40485 686 aa5.18□□□□□ -1.58
FOB1YDR110W YGR201CP42936 225 aa5.18□□□□□ -1.58
FOB1YDR110W YJR054WP47114 497 aa5.18□□□□□ -1.58
FOB1YDR110W YLR460CP54007 376 aa5.18□□□□□ -1.58
FOB1YDR110W DTD1Q07648 150 aaKnown RBP5.18□□□□□ -1.58
FOB1YDR110W SGO1Q08490 590 aa5.18□□□□□ -1.58
FOB1YDR110W TPT1Q12272 230 aaKnown RBP5.18□□□□□ -1.58
FOB1YDR110W POM34Q12445 299 aa5.18□□□□□ -1.58
FOB1YDR110W ARG82P07250 355 aa5.17□□□□□ -1.58
FOB1YDR110W RPL31BP0C2H9 113 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W PCT1P13259 424 aa5.17□□□□□ -1.58
FOB1YDR110W HPR1P17629 752 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W CPR4P25334 318 aa5.17□□□□□ -1.58
FOB1YDR110W RFA2P26754 273 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W ITR2P30606 609 aa5.17□□□□□ -1.58
FOB1YDR110W TRM2P33753 639 aa5.17□□□□□ -1.58
FOB1YDR110W OLA1P38219 394 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W QDR3P38227 689 aa5.17□□□□□ -1.58
FOB1YDR110W ICS2P38284 255 aa5.17□□□□□ -1.58
FOB1YDR110W SUL1P38359 859 aa5.17□□□□□ -1.58
FOB1YDR110W ARO9P38840 513 aaPredicted RBP5.17□□□□□ -1.58
FOB1YDR110W LAS21P40367 830 aa5.17□□□□□ -1.58
FOB1YDR110W YML108WQ03759 105 aa5.17□□□□□ -1.58
FOB1YDR110W ADH6Q04894 360 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W BUR2Q05949 395 aa5.17□□□□□ -1.58
FOB1YDR110W HMS1Q12398 434 aa5.17□□□□□ -1.58
FOB1YDR110W ART10P18634 518 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W KGD2P19262 463 aaPredicted RBP5.17□□□□□ -1.58
FOB1YDR110W PDE1P22434 369 aa5.17□□□□□ -1.58
FOB1YDR110W AIM17P23180 465 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W VPS21P36017 210 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W MRPL7P36519 292 aa5.17□□□□□ -1.58
FOB1YDR110W MRPL17P36528 281 aa5.17□□□□□ -1.58
FOB1YDR110W AAP1P37898 856 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W TRM5P38793 499 aa5.17□□□□□ -1.58
FOB1YDR110W ATG7P38862 630 aa5.17□□□□□ -1.58
FOB1YDR110W SPC97P38863 823 aa5.17□□□□□ -1.58
FOB1YDR110W CCC1P47818 322 aa5.17□□□□□ -1.58
FOB1YDR110W YPR003CP53394 754 aa5.17□□□□□ -1.58
FOB1YDR110W TMA20P89886 181 aaPredicted RBP5.17□□□□□ -1.58
FOB1YDR110W SNO1Q03144 224 aa5.17□□□□□ -1.58
FOB1YDR110W HCR1Q05775 265 aaKnown RBP5.17□□□□□ -1.58
FOB1YDR110W COQ9Q05779 260 aa5.17□□□□□ -1.58
FOB1YDR110W COQ11Q05892 277 aa5.17□□□□□ -1.58
FOB1YDR110W MDM30Q05930 598 aa5.17□□□□□ -1.58
FOB1YDR110W MFG1Q07684 458 aa5.17□□□□□ -1.58
FOB1YDR110W RCL1Q08096 367 aaPredicted RBP5.17□□□□□ -1.58
FOB1YDR110W YPR1Q12458 312 aa5.17□□□□□ -1.58
FOB1YDR110W Q0144Q9ZZW2 109 aa5.17□□□□□ -1.58
FOB1YDR110W CHS2P14180 963 aa5.16□□□□□ -1.58
FOB1YDR110W CPT1P17898 393 aa5.16□□□□□ -1.58
FOB1YDR110W PUT3P25502 979 aaPredicted RBP5.16□□□□□ -1.58
FOB1YDR110W MDH3P32419 343 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
FOB1YDR110W NRP1P32770 719 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
FOB1YDR110W CSG2P35206 410 aa5.16□□□□□ -1.58
FOB1YDR110W FLO10P36170 1169 aa5.16□□□□□ -1.58
FOB1YDR110W HIS2P38635 335 aa5.16□□□□□ -1.58
FOB1YDR110W CEM1P39525 442 aa5.16□□□□□ -1.58
FOB1YDR110W RPN11P43588 306 aaKnown RBP5.16□□□□□ -1.58
FOB1YDR110W BNA3P47039 444 aaKnown RBP5.16□□□□□ -1.58
FOB1YDR110W MTR3P48240 250 aaPredicted RBP5.16□□□□□ -1.58
FOB1YDR110W YMD8Q03697 442 aa5.16□□□□□ -1.58
FOB1YDR110W HOF1Q05080 669 aa5.16□□□□□ -1.58
FOB1YDR110W YDR344CQ05510 147 aa5.16□□□□□ -1.58
FOB1YDR110W YPR127WQ06494 345 aa5.16□□□□□ -1.58
FOB1YDR110W YLR036CQ07986 203 aa5.16□□□□□ -1.58
FOB1YDR110W YPR022CQ12139 1133 aa5.16□□□□□ -1.58
FOB1YDR110W YKL068W-AQ3E826 78 aa5.16□□□□□ -1.58
FOB1YDR110W RPP2AP05319 106 aaKnown RBP5.15□□□□□ -1.58
FOB1YDR110W TRP4P07285 380 aaPredicted RBP5.15□□□□□ -1.58
FOB1YDR110W YLL053CP0CD98 152 aa5.15□□□□□ -1.58
FOB1YDR110W PUP3P25451 205 aaKnown RBP5.15□□□□□ -1.58
FOB1YDR110W GSH1P32477 678 aa5.15□□□□□ -1.58
FOB1YDR110W UPS2P35200 230 aa5.15□□□□□ -1.58
FOB1YDR110W RRN10P38204 145 aa5.15□□□□□ -1.58
FOB1YDR110W TSC10P38342 320 aa5.15□□□□□ -1.58
FOB1YDR110W IKI1P38874 309 aa5.15□□□□□ -1.58
FOB1YDR110W ECM1P39715 212 aa5.15□□□□□ -1.58
FOB1YDR110W YER186CP40101 306 aa5.15□□□□□ -1.58
FOB1YDR110W GPI1P53306 609 aa5.15□□□□□ -1.58
FOB1YDR110W YMR178WQ03219 274 aaKnown RBP5.15□□□□□ -1.58
FOB1YDR110W OST6Q03723 332 aa5.15□□□□□ -1.58
FOB1YDR110W ASR1Q06834 288 aa5.15□□□□□ -1.58
FOB1YDR110W YPL225WQ08971 146 aaKnown RBP5.15□□□□□ -1.58
FOB1YDR110W MRH1Q12117 320 aaPredicted RBP5.15□□□□□ -1.58
FOB1YDR110W WIP1Q2V2P8 89 aa5.15□□□□□ -1.58
FOB1YDR110W HIS5P07172 385 aa5.14□□□□□ -1.59
FOB1YDR110W SPS4P09937 338 aa5.14□□□□□ -1.59
FOB1YDR110W YMR085WP0CF18 432 aa5.14□□□□□ -1.59
FOB1YDR110W PET54P10834 293 aa5.14□□□□□ -1.59
FOB1YDR110W YSP3P25036 478 aa5.14□□□□□ -1.59
FOB1YDR110W BUD23P25627 275 aaPredicted RBP5.14□□□□□ -1.59
FOB1YDR110W PPZ1P26570 692 aa5.14□□□□□ -1.59
FOB1YDR110W IES6P32617 166 aa5.14□□□□□ -1.59
FOB1YDR110W TMT1P32643 299 aa5.14□□□□□ -1.59
FOB1YDR110W SHE3P38272 425 aaKnown RBP5.14□□□□□ -1.59
FOB1YDR110W STP2P38704 541 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms