RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	TAD2	P47058	250 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	TAH11	P47112	604 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	YAE1	P47118	141 aa	Predicted RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	SSU72	P53538	206 aa	Predicted RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	MSC1	Q03104	513 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	CTL1	Q03220	320 aa	Known RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	YDR248C	Q03786	193 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	MFG1	Q07684	458 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	RGT2	Q12300	763 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	MHT1	Q12525	324 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	FSH3	Q99369	266 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	STF1	P01098	86 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	PRB1	P09232	635 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	RPL31A	P0C2H8	113 aa	Known RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	RPL31B	P0C2H9	113 aa	Known RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	PDX1	P16451	410 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	MAG1	P22134	296 aa	Known RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	GAC1	P28006	793 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	MRPL6	P32904	214 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	SKT5	P34226	696 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	DTR1	P38125	572 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	YBL029W	P38201	376 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	YBR053C	P38235	358 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	FMO1	P38866	432 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	SUR2	P38992	349 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	YAR028W	P39548	234 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	HPA3	P39979	161 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	SNM1	P40993	198 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	PRM10	P42946	383 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	CLA4	P48562	842 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	NBP35	P52920	328 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	GND2	P53319	492 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	ERV29	P53337	310 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	NUP116	Q02630	1113 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	MRP51	Q02950	344 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	YPR127W	Q06494	345 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	HOS1	Q12214	470 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	NYV1	Q12255	253 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	EAF3	Q12432	401 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	KCS1	Q12494	1050 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	SUC2	P00724	532 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	CIT1	P00890	479 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	NAM2	P11325	894 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	SNF6	P18888	332 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	MRPL28	P36527	147 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	APL3	P38065	1025 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	ROT2	P38138	954 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	XDJ1	P39102	459 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	HAT2	P39984	401 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	GET2	P40056	285 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	COG3	P40094	801 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	GLC8	P41818	229 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	YFL012W	P43580	148 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	PHO86	P46956	311 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	DAN1	P47178	298 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	SOL1	P50278	321 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	COG7	P53195	279 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	NQM1	P53228	333 aa	Predicted RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	MKC7	P53379	596 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	YPL014W	Q02606	381 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	YDC1	Q02896	317 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	ECM30	Q06673	1274 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	SRO7	Q12038	1033 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	TGS1	Q12052	315 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	WIP1	Q2V2P8	89 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	MEX67	Q99257	599 aa	Known RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	HRP1	Q99383	534 aa	Known RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	HOP1	P20050	605 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	ZRC1	P20107	442 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	CYS3	P31373	394 aa	Known RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	ARP2	P32381	391 aa	Known RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	SPS19	P32573	292 aa	Known RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	SKG6	P32900	734 aa	Predicted RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	YPT7	P32939	208 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	VPS45	P38932	577 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	ICP55	P40051	511 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	BAP3	P41815	604 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	SSU1	P41930	458 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	DPB11	P47027	764 aa	Predicted RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	YJR012C	P47087	207 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	DIA3	P52290	468 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	ACS2	P52910	683 aa	Known RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	NCS6	P53088	359 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	MPA43	P53583	542 aa	Predicted RBP	4.93	□□□□□ -1.62
DBF4	YDR052C	ROD1	Q02805	837 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	YPL080C	Q02826	108 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	SKY1	Q03656	742 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	YAP6	Q03935	383 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	YDR124W	Q04608	324 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	MSC3	Q05812	728 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	SKG3	Q06315	1026 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	FDH1	Q08911	376 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	YPL257W	Q08974	193 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	YMR030W-A	Q3E760	96 aa		4.93	□□□□□ -1.62
DBF4	YDR052C	HXK2	P04807	486 aa	Known RBP	4.92	□□□□□ -1.62
DBF4	YDR052C	ADH3	P07246	375 aa	Known RBP	4.92	□□□□□ -1.62
DBF4	YDR052C	ERD2	P18414	219 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	AFT1	P22149	690 aa		4.92	□□□□□ -1.62
DBF4	YDR052C	PUP3	P25451	205 aa	Known RBP	4.92	□□□□□ -1.62
DBF4	YDR052C	TCD2	P36101	447 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms