RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C MRP13P12686 339 aa4.28□□□□□ -1.72
CDC48YDL126C YPK1P12688 680 aaKnown RBP4.28□□□□□ -1.72
CDC48YDL126C POL30P15873 258 aaKnown RBP4.28□□□□□ -1.72
CDC48YDL126C HEM15P16622 393 aa4.28□□□□□ -1.72
CDC48YDL126C PRP2P20095 876 aaPredicted RBP4.28□□□□□ -1.72
CDC48YDL126C LRE1P25579 583 aaKnown RBP4.28□□□□□ -1.72
CDC48YDL126C GSH1P32477 678 aa4.28□□□□□ -1.72
CDC48YDL126C SIP1P32578 815 aa4.28□□□□□ -1.72
CDC48YDL126C FRE1P32791 686 aa4.28□□□□□ -1.72
CDC48YDL126C MRPL7P36519 292 aa4.28□□□□□ -1.72
CDC48YDL126C SHE3P38272 425 aaKnown RBP4.28□□□□□ -1.72
CDC48YDL126C WSS1P38838 269 aa4.28□□□□□ -1.72
CDC48YDL126C YHR182WP38870 785 aa4.28□□□□□ -1.72
CDC48YDL126C TVP23P38962 199 aa4.28□□□□□ -1.72
CDC48YDL126C ICE2P40499 491 aa4.28□□□□□ -1.72
CDC48YDL126C HXT9P40885 567 aa4.28□□□□□ -1.72
CDC48YDL126C ASG7P46993 209 aa4.28□□□□□ -1.72
CDC48YDL126C FHN1P53279 174 aa4.28□□□□□ -1.72
CDC48YDL126C ACL4Q03771 387 aa4.28□□□□□ -1.72
CDC48YDL126C FMN1Q03778 218 aa4.28□□□□□ -1.72
CDC48YDL126C SNX41Q04053 625 aa4.28□□□□□ -1.72
CDC48YDL126C RPN9Q04062 393 aaKnown RBP4.28□□□□□ -1.72
CDC48YDL126C RDR1Q08904 546 aa4.28□□□□□ -1.72
CDC48YDL126C GRE1Q08969 168 aa4.28□□□□□ -1.72
CDC48YDL126C ILV2P07342 687 aaKnown RBP4.28□□□□□ -1.72
CDC48YDL126C YML003WP0CF16 290 aa4.28□□□□□ -1.72
CDC48YDL126C YAK1P14680 807 aa4.28□□□□□ -1.72
CDC48YDL126C KGD1P20967 1014 aaKnown RBP4.28□□□□□ -1.72
CDC48YDL126C RNA15P25299 296 aaPredicted RBP4.28□□□□□ -1.72
CDC48YDL126C RSA4P25382 515 aaKnown RBP4.28□□□□□ -1.72
CDC48YDL126C MGT1P26188 188 aa4.28□□□□□ -1.72
CDC48YDL126C SUA5P32579 426 aa4.28□□□□□ -1.72
CDC48YDL126C PEX2P32800 271 aa4.28□□□□□ -1.72
CDC48YDL126C KKQ8P36004 724 aa4.28□□□□□ -1.72
CDC48YDL126C MRPL4P36517 319 aa4.28□□□□□ -1.72
CDC48YDL126C TAT1P38085 619 aa4.28□□□□□ -1.72
CDC48YDL126C YHL026CP38740 315 aa4.28□□□□□ -1.72
CDC48YDL126C SUR2P38992 349 aa4.28□□□□□ -1.72
CDC48YDL126C RMD6P39975 231 aa4.28□□□□□ -1.72
CDC48YDL126C CTK2P46962 323 aa4.28□□□□□ -1.72
CDC48YDL126C GTO1P48239 356 aa4.28□□□□□ -1.72
CDC48YDL126C IMO32P53219 342 aa4.28□□□□□ -1.72
CDC48YDL126C YNL092WP53934 400 aa4.28□□□□□ -1.72
CDC48YDL126C MMT1Q03218 510 aa4.28□□□□□ -1.72
CDC48YDL126C BNA7Q04066 261 aa4.28□□□□□ -1.72
CDC48YDL126C YLR224WQ05947 369 aa4.28□□□□□ -1.72
CDC48YDL126C MUM3Q08750 479 aa4.28□□□□□ -1.72
CDC48YDL126C YLR302CO13544 120 aa4.27□□□□□ -1.73
CDC48YDL126C GAL80P04387 435 aa4.27□□□□□ -1.73
CDC48YDL126C RPP2AP05319 106 aaKnown RBP4.27□□□□□ -1.73
CDC48YDL126C LEU4P06208 619 aaKnown RBP4.27□□□□□ -1.73
CDC48YDL126C EXO70P19658 623 aa4.27□□□□□ -1.73
CDC48YDL126C URK1P27515 501 aa4.27□□□□□ -1.73
CDC48YDL126C CSE2P33308 149 aa4.27□□□□□ -1.73
CDC48YDL126C JEN1P36035 616 aa4.27□□□□□ -1.73
CDC48YDL126C CBT1P36038 271 aaPredicted RBP4.27□□□□□ -1.73
CDC48YDL126C IML3P38265 245 aa4.27□□□□□ -1.73
CDC48YDL126C RRP3P38712 501 aaKnown RBP4.27□□□□□ -1.73
CDC48YDL126C NPT1P39683 429 aaKnown RBP4.27□□□□□ -1.73
CDC48YDL126C YFR018CP43599 363 aa4.27□□□□□ -1.73
CDC48YDL126C SNG1P46950 547 aa4.27□□□□□ -1.73
CDC48YDL126C STP1Q00947 519 aa4.27□□□□□ -1.73
CDC48YDL126C YDC1Q02896 317 aa4.27□□□□□ -1.73
CDC48YDL126C ELP3Q02908 557 aaKnown RBP4.27□□□□□ -1.73
CDC48YDL126C NHP10Q03435 203 aa4.27□□□□□ -1.73
CDC48YDL126C BCP1Q06338 283 aa4.27□□□□□ -1.73
CDC48YDL126C THI20Q08224 551 aa4.27□□□□□ -1.73
CDC48YDL126C DCI1Q08558 271 aa4.27□□□□□ -1.73
CDC48YDL126C ESA1Q08649 445 aa4.27□□□□□ -1.73
CDC48YDL126C RAX1Q08760 435 aa4.27□□□□□ -1.73
CDC48YDL126C FEX2Q08991 375 aa4.27□□□□□ -1.73
CDC48YDL126C AEP3Q12089 606 aa4.27□□□□□ -1.73
CDC48YDL126C YLL056CQ12177 298 aa4.27□□□□□ -1.73
CDC48YDL126C YPR053CQ6Q5F3 151 aa4.27□□□□□ -1.73
CDC48YDL126C TRP4P07285 380 aaPredicted RBP4.27□□□□□ -1.73
CDC48YDL126C GAC1P28006 793 aa4.27□□□□□ -1.73
CDC48YDL126C HES1P35843 434 aa4.27□□□□□ -1.73
CDC48YDL126C IST3P40565 148 aaPredicted RBP4.27□□□□□ -1.73
CDC48YDL126C LOH1P47055 219 aa4.27□□□□□ -1.73
CDC48YDL126C MPS3P47069 682 aa4.27□□□□□ -1.73
CDC48YDL126C UBC12P52491 188 aa4.27□□□□□ -1.73
CDC48YDL126C SPC98P53540 846 aa4.27□□□□□ -1.73
CDC48YDL126C SLG1P54867 378 aa4.27□□□□□ -1.73
CDC48YDL126C CWC27Q02770 301 aa4.27□□□□□ -1.73
CDC48YDL126C NRG1Q03125 231 aa4.27□□□□□ -1.73
CDC48YDL126C CSN9Q03981 162 aa4.27□□□□□ -1.73
CDC48YDL126C NDE2Q07500 545 aa4.27□□□□□ -1.73
CDC48YDL126C MLH3Q12083 715 aa4.27□□□□□ -1.73
CDC48YDL126C TFB5Q3E7C1 72 aaPredicted RBP4.27□□□□□ -1.73
CDC48YDL126C IZH4Q99393 312 aa4.27□□□□□ -1.73
CDC48YDL126C HIP1P06775 603 aa4.26□□□□□ -1.73
CDC48YDL126C UGA1P17649 471 aa4.26□□□□□ -1.73
CDC48YDL126C PTC6P25646 442 aa4.26□□□□□ -1.73
CDC48YDL126C CDC50P25656 391 aa4.26□□□□□ -1.73
CDC48YDL126C TFC1P32367 649 aa4.26□□□□□ -1.73
CDC48YDL126C NDC1P32500 655 aa4.26□□□□□ -1.73
CDC48YDL126C CMC1P36064 111 aa4.26□□□□□ -1.73
CDC48YDL126C ARA1P38115 344 aa4.26□□□□□ -1.73
CDC48YDL126C AVT2P39981 480 aa4.26□□□□□ -1.73
CDC48YDL126C AVT6P40074 448 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms