RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C RGS2Q99188 309 aa1.29□□□□□ -2.2
MSH3YCR092C Q0144Q9ZZW2 109 aa1.29□□□□□ -2.2
MSH3YCR092C COR1P07256 457 aa1.28□□□□□ -2.2
MSH3YCR092C SEC12P11655 471 aa1.28□□□□□ -2.2
MSH3YCR092C YCP4P25349 247 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C RPB9P27999 122 aa1.28□□□□□ -2.2
MSH3YCR092C SEC66P33754 206 aa1.28□□□□□ -2.2
MSH3YCR092C PEX6P33760 1030 aa1.28□□□□□ -2.2
MSH3YCR092C DHR2P36009 735 aaPredicted RBP1.28□□□□□ -2.2
MSH3YCR092C SPP381P38282 291 aaPredicted RBP1.28□□□□□ -2.2
MSH3YCR092C YER188WP40103 239 aa1.28□□□□□ -2.2
MSH3YCR092C AIM20P40451 204 aa1.28□□□□□ -2.2
MSH3YCR092C INA22P40576 216 aa1.28□□□□□ -2.2
MSH3YCR092C IRC6P43615 237 aa1.28□□□□□ -2.2
MSH3YCR092C RPE1P46969 238 aa1.28□□□□□ -2.2
MSH3YCR092C YJL043WP47053 257 aa1.28□□□□□ -2.2
MSH3YCR092C CWC22P53333 577 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C SWP1Q02795 286 aa1.28□□□□□ -2.2
MSH3YCR092C ATG21Q02887 496 aa1.28□□□□□ -2.2
MSH3YCR092C NGL2Q03264 515 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C ARO10Q06408 635 aa1.28□□□□□ -2.2
MSH3YCR092C YLL007CQ07799 665 aa1.28□□□□□ -2.2
MSH3YCR092C AFT2Q08957 416 aa1.28□□□□□ -2.2
MSH3YCR092C YPR202WQ08993 238 aa1.28□□□□□ -2.2
MSH3YCR092C FCY22Q12119 530 aa1.28□□□□□ -2.2
MSH3YCR092C NSL1Q12143 216 aa1.28□□□□□ -2.2
MSH3YCR092C NFI1Q12216 726 aa1.28□□□□□ -2.2
MSH3YCR092C MHT1Q12525 324 aa1.28□□□□□ -2.2
MSH3YCR092C SCEIP03882 235 aa1.28□□□□□ -2.2
MSH3YCR092C RAD1P06777 1100 aa1.28□□□□□ -2.2
MSH3YCR092C YML003WP0CF16 290 aa1.28□□□□□ -2.2
MSH3YCR092C RPS23AP0CX29 145 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C RPS23BP0CX30 145 aa1.28□□□□□ -2.2
MSH3YCR092C MCK1P21965 375 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C CDC10P25342 322 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C MRPL9P31334 269 aa1.28□□□□□ -2.2
MSH3YCR092C MNS1P32906 549 aa1.28□□□□□ -2.2
MSH3YCR092C PTC1P35182 281 aa1.28□□□□□ -2.2
MSH3YCR092C CAB3P36076 571 aa1.28□□□□□ -2.2
MSH3YCR092C JNM1P36224 373 aa1.28□□□□□ -2.2
MSH3YCR092C ROT2P38138 954 aa1.28□□□□□ -2.2
MSH3YCR092C THI2P38141 450 aa1.28□□□□□ -2.2
MSH3YCR092C BNA4P38169 460 aa1.28□□□□□ -2.2
MSH3YCR092C FAT1P38225 669 aa1.28□□□□□ -2.2
MSH3YCR092C NAB3P38996 802 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
MSH3YCR092C PIC2P40035 300 aa1.28□□□□□ -2.2
MSH3YCR092C YNL194CP40169 301 aa1.28□□□□□ -2.2
MSH3YCR092C CCT7P42943 550 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
MSH3YCR092C YGR066CP53242 292 aa1.28□□□□□ -2.2
MSH3YCR092C COS1P53822 381 aa1.28□□□□□ -2.2
MSH3YCR092C ASI1P54074 624 aa1.28□□□□□ -2.2
MSH3YCR092C RHO4Q00246 291 aa1.28□□□□□ -2.2
MSH3YCR092C YPL108WQ02872 168 aaPredicted RBP1.28□□□□□ -2.2
MSH3YCR092C VMS1Q04311 632 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C SNT309Q06091 175 aaPredicted RBP1.28□□□□□ -2.2
MSH3YCR092C ARR2Q06597 130 aa1.28□□□□□ -2.2
MSH3YCR092C YOL159CQ08300 171 aa1.28□□□□□ -2.2
MSH3YCR092C FRE3Q08905 711 aa1.28□□□□□ -2.2
MSH3YCR092C SRL2Q12020 392 aa1.28□□□□□ -2.2
MSH3YCR092C NTO1Q12311 748 aa1.28□□□□□ -2.2
MSH3YCR092C RIB2Q12362 591 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C RRI1Q12468 440 aa1.28□□□□□ -2.2
MSH3YCR092C DET1Q99288 334 aaKnown RBP1.28□□□□□ -2.2
MSH3YCR092C BGL2P15703 313 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C PDA1P16387 420 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C SPO12P17123 173 aa1.27□□□□□ -2.21
MSH3YCR092C ATP7P30902 174 aa1.27□□□□□ -2.21
MSH3YCR092C CAT2P32796 670 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C VPS51P36116 164 aa1.27□□□□□ -2.21
MSH3YCR092C RIM2P38127 377 aa1.27□□□□□ -2.21
MSH3YCR092C URA8P38627 578 aaPredicted RBP1.27□□□□□ -2.21
MSH3YCR092C PZF1P39933 429 aa1.27□□□□□ -2.21
MSH3YCR092C GDI1P39958 451 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C PRM2P40534 656 aa1.27□□□□□ -2.21
MSH3YCR092C PAC11P40960 533 aa1.27□□□□□ -2.21
MSH3YCR092C GPP1P41277 250 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C PMT6P42934 759 aa1.27□□□□□ -2.21
MSH3YCR092C CHA4P43634 648 aa1.27□□□□□ -2.21
MSH3YCR092C ADO1P47143 340 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C IBA57P47158 497 aa1.27□□□□□ -2.21
MSH3YCR092C TOM22P49334 152 aa1.27□□□□□ -2.21
MSH3YCR092C ATP22P50273 684 aaPredicted RBP1.27□□□□□ -2.21
MSH3YCR092C EMC4P53073 190 aa1.27□□□□□ -2.21
MSH3YCR092C FHN1P53279 174 aa1.27□□□□□ -2.21
MSH3YCR092C COG6P53959 839 aa1.27□□□□□ -2.21
MSH3YCR092C GTR1Q00582 310 aa1.27□□□□□ -2.21
MSH3YCR092C STD1Q02794 444 aa1.27□□□□□ -2.21
MSH3YCR092C BUD22Q04347 519 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C ADE13Q05911 482 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C ATG26Q06321 1198 aa1.27□□□□□ -2.21
MSH3YCR092C RLM1Q12224 676 aa1.27□□□□□ -2.21
MSH3YCR092C SAS5Q99314 248 aa1.27□□□□□ -2.21
MSH3YCR092C STE2D6VTK4 431 aa1.27□□□□□ -2.21
MSH3YCR092C TDH2P00358 332 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C TDH3P00359 332 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
MSH3YCR092C ARG4P04076 463 aaPredicted RBP1.27□□□□□ -2.21
MSH3YCR092C YOL163WP0CF20 169 aa1.27□□□□□ -2.21
MSH3YCR092C SSC1P0CS90 654 aaKnown RBP1.27□□□□□ -2.21
MSH3YCR092C HNM1P19807 563 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms