RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B TAF11Q04226 346 aa0.89□□□□□ -2.27
HTL1YCR020W-B YDL109CQ12103 647 aa0.89□□□□□ -2.27
HTL1YCR020W-B RNH203Q12338 110 aa0.89□□□□□ -2.27
HTL1YCR020W-B RPS14AP06367 137 aaKnown RBP0.88□□□□□ -2.27
HTL1YCR020W-B CPT1P17898 393 aa0.88□□□□□ -2.27
HTL1YCR020W-B ERV1P27882 189 aa0.88□□□□□ -2.27
HTL1YCR020W-B MKK1P32490 508 aa0.88□□□□□ -2.27
HTL1YCR020W-B ZTA1P38230 334 aaKnown RBP0.88□□□□□ -2.27
HTL1YCR020W-B SLM4P38247 162 aa0.88□□□□□ -2.27
HTL1YCR020W-B RPS14BP39516 138 aaKnown RBP0.88□□□□□ -2.27
HTL1YCR020W-B NOC2P39744 710 aaKnown RBP0.88□□□□□ -2.27
HTL1YCR020W-B SER3P40054 469 aa0.88□□□□□ -2.27
HTL1YCR020W-B AIM23P47015 356 aa0.88□□□□□ -2.27
HTL1YCR020W-B YGL088WP53151 121 aa0.88□□□□□ -2.27
HTL1YCR020W-B BNI5P53890 448 aaKnown RBP0.88□□□□□ -2.27
HTL1YCR020W-B SED5Q01590 340 aa0.88□□□□□ -2.27
HTL1YCR020W-B VTI1Q04338 217 aa0.88□□□□□ -2.27
HTL1YCR020W-B AEP3Q12089 606 aa0.88□□□□□ -2.27
HTL1YCR020W-B PGA3Q12746 312 aaKnown RBP0.88□□□□□ -2.27
HTL1YCR020W-B RPL23AP0CX41 137 aaKnown RBP0.87□□□□□ -2.27
HTL1YCR020W-B RPL23BP0CX42 137 aaKnown RBP0.87□□□□□ -2.27
HTL1YCR020W-B RPL12AP0CX53 165 aaKnown RBP0.87□□□□□ -2.27
HTL1YCR020W-B RPL12BP0CX54 165 aa0.87□□□□□ -2.27
HTL1YCR020W-B CUP2P15315 225 aa0.87□□□□□ -2.27
HTL1YCR020W-B SAG1P20840 650 aa0.87□□□□□ -2.27
HTL1YCR020W-B MIG1P27705 504 aa0.87□□□□□ -2.27
HTL1YCR020W-B YBL081WP38180 368 aaKnown RBP0.87□□□□□ -2.27
HTL1YCR020W-B ATG12P38316 186 aa0.87□□□□□ -2.27
HTL1YCR020W-B NDE1P40215 560 aa0.87□□□□□ -2.27
HTL1YCR020W-B ASG7P46993 209 aa0.87□□□□□ -2.27
HTL1YCR020W-B PMT5P52867 743 aa0.87□□□□□ -2.27
HTL1YCR020W-B NRM1P53718 249 aa0.87□□□□□ -2.27
HTL1YCR020W-B CDD1Q06549 142 aa0.87□□□□□ -2.27
HTL1YCR020W-B PMT2P31382 759 aa0.86□□□□□ -2.27
HTL1YCR020W-B QDR3P38227 689 aa0.86□□□□□ -2.27
HTL1YCR020W-B ECM14P38836 430 aa0.86□□□□□ -2.27
HTL1YCR020W-B TOM22P49334 152 aa0.86□□□□□ -2.27
HTL1YCR020W-B FRE8Q12209 686 aa0.86□□□□□ -2.27
HTL1YCR020W-B RRI2Q12348 645 aa0.86□□□□□ -2.27
HTL1YCR020W-B BGL2P15703 313 aaKnown RBP0.85□□□□□ -2.27
HTL1YCR020W-B HPR1P17629 752 aaKnown RBP0.85□□□□□ -2.27
HTL1YCR020W-B MIR1P23641 311 aaKnown RBP0.85□□□□□ -2.27
HTL1YCR020W-B PHO91P27514 894 aa0.85□□□□□ -2.27
HTL1YCR020W-B NRP1P32770 719 aaKnown RBP RIP-Chip data0.85□□□□□ -2.27not detected
HTL1YCR020W-B TOA2P32774 122 aa0.85□□□□□ -2.27
HTL1YCR020W-B YSC83P32792 385 aa0.85□□□□□ -2.27
HTL1YCR020W-B YKR032WP36127 104 aa0.85□□□□□ -2.27
HTL1YCR020W-B FAD1P38913 306 aa0.85□□□□□ -2.27
HTL1YCR020W-B ROG1P53118 685 aa0.85□□□□□ -2.27
HTL1YCR020W-B PRM1P53835 661 aa0.85□□□□□ -2.27
HTL1YCR020W-B SMD1Q02260 146 aaPredicted RBP0.85□□□□□ -2.27
HTL1YCR020W-B UTP15Q04305 513 aaKnown RBP0.85□□□□□ -2.27
HTL1YCR020W-B YLR287CQ05881 355 aa0.85□□□□□ -2.27
HTL1YCR020W-B NSE1Q07913 336 aa0.85□□□□□ -2.27
HTL1YCR020W-B GAT3Q07928 141 aa0.85□□□□□ -2.27
HTL1YCR020W-B SFI1Q12369 946 aa0.85□□□□□ -2.27
HTL1YCR020W-B URA7P28274 579 aaKnown RBP0.84□□□□□ -2.27
HTL1YCR020W-B RBG1P39729 369 aa0.84□□□□□ -2.27
HTL1YCR020W-B PRP3Q03338 469 aaPredicted RBP0.84□□□□□ -2.27
HTL1YCR020W-B URC2Q04411 772 aa0.84□□□□□ -2.27
HTL1YCR020W-B APC4Q04601 652 aa0.84□□□□□ -2.27
HTL1YCR020W-B YDR341CQ05506 607 aaKnown RBP0.84□□□□□ -2.27
HTL1YCR020W-B CLP1Q08685 445 aaPredicted RBP0.84□□□□□ -2.27
HTL1YCR020W-B MMT2Q08970 484 aa0.84□□□□□ -2.27
HTL1YCR020W-B PDE2P06776 526 aa0.83□□□□□ -2.28
HTL1YCR020W-B NAS6P50086 228 aa0.83□□□□□ -2.28
HTL1YCR020W-B SHE4P51534 789 aa0.83□□□□□ -2.28
HTL1YCR020W-B NBP1P52919 319 aaPredicted RBP0.83□□□□□ -2.28
HTL1YCR020W-B YPL080CQ02826 108 aa0.83□□□□□ -2.28
HTL1YCR020W-B YPL113CQ02961 396 aa0.83□□□□□ -2.28
HTL1YCR020W-B GMC1Q04399 608 aa0.83□□□□□ -2.28
HTL1YCR020W-B YLR456WQ06199 204 aa0.83□□□□□ -2.28
HTL1YCR020W-B YLH47Q06493 454 aa0.83□□□□□ -2.28
HTL1YCR020W-B ARR1Q06596 294 aa0.83□□□□□ -2.28
HTL1YCR020W-B TSR2Q06672 205 aaKnown RBP0.83□□□□□ -2.28
HTL1YCR020W-B RLP24Q07915 199 aaKnown RBP0.83□□□□□ -2.28
HTL1YCR020W-B PRP46Q12417 451 aaPredicted RBP0.83□□□□□ -2.28
HTL1YCR020W-B MET2P08465 486 aa0.82□□□□□ -2.28
HTL1YCR020W-B TIP20P33891 701 aa0.82□□□□□ -2.28
HTL1YCR020W-B BYE1P36106 594 aa0.82□□□□□ -2.28
HTL1YCR020W-B TAE1P38340 232 aa0.82□□□□□ -2.28
HTL1YCR020W-B MED6P38782 295 aa0.82□□□□□ -2.28
HTL1YCR020W-B YMR244WQ04018 355 aa0.82□□□□□ -2.28
HTL1YCR020W-B GTO3Q04806 366 aa0.82□□□□□ -2.28
HTL1YCR020W-B YPR063CQ12160 140 aa0.82□□□□□ -2.28
HTL1YCR020W-B RRG1Q12167 365 aaPredicted RBP0.82□□□□□ -2.28
HTL1YCR020W-B RNA1P11745 407 aaKnown RBP0.81□□□□□ -2.28
HTL1YCR020W-B ADK2P26364 225 aa0.81□□□□□ -2.28
HTL1YCR020W-B PAC11P40960 533 aa0.81□□□□□ -2.28
HTL1YCR020W-B HIT1P46973 164 aa0.81□□□□□ -2.28
HTL1YCR020W-B INP1Q03694 420 aa0.81□□□□□ -2.28
HTL1YCR020W-B YDL121CQ07541 149 aa0.81□□□□□ -2.28
HTL1YCR020W-B SSE1P32589 693 aaKnown RBP0.8□□□□□ -2.28
HTL1YCR020W-B SMC2P38989 1170 aaKnown RBP0.8□□□□□ -2.28
HTL1YCR020W-B LSM5P40089 93 aaKnown RBP0.8□□□□□ -2.28
HTL1YCR020W-B BUD13P46947 266 aaPredicted RBP0.8□□□□□ -2.28
HTL1YCR020W-B YDR114CQ04597 100 aa0.8□□□□□ -2.28
HTL1YCR020W-B ERB1Q04660 807 aaKnown RBP0.8□□□□□ -2.28
HTL1YCR020W-B KRE1P17260 313 aa0.79□□□□□ -2.28
HTL1YCR020W-B FUR1P18562 216 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms