RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W GPI12P23797 304 aa5.2□□□□□ -1.58
SHM1YBR263W ZTA1P38230 334 aaKnown RBP5.2□□□□□ -1.58
SHM1YBR263W TPA1P40032 644 aaKnown RBP5.2□□□□□ -1.58
SHM1YBR263W ERP6P53198 216 aa5.2□□□□□ -1.58
SHM1YBR263W YGR067CP53243 804 aa5.2□□□□□ -1.58
SHM1YBR263W GTF1P53260 183 aaPredicted RBP5.2□□□□□ -1.58
SHM1YBR263W COS6P53344 381 aa5.2□□□□□ -1.58
SHM1YBR263W YNL095CP53932 642 aa5.2□□□□□ -1.58
SHM1YBR263W YAP6Q03935 383 aa5.2□□□□□ -1.58
SHM1YBR263W HMO1Q03973 246 aaKnown RBP5.2□□□□□ -1.58
SHM1YBR263W ATG38Q05789 226 aaKnown RBP5.2□□□□□ -1.58
SHM1YBR263W YPL066WQ12194 479 aa5.2□□□□□ -1.58
SHM1YBR263W YDL199CQ12407 687 aa5.2□□□□□ -1.58
SHM1YBR263W TIM9O74700 87 aa5.19□□□□□ -1.58
SHM1YBR263W YPT1P01123 206 aaKnown RBP5.19□□□□□ -1.58
SHM1YBR263W CUP1-1P0CX80 61 aa5.19□□□□□ -1.58
SHM1YBR263W CUP1-2P0CX81 61 aa5.19□□□□□ -1.58
SHM1YBR263W CBS1P14066 229 aa5.19□□□□□ -1.58
SHM1YBR263W YAK1P14680 807 aa5.19□□□□□ -1.58
SHM1YBR263W THR1P17423 357 aaKnown RBP5.19□□□□□ -1.58
SHM1YBR263W CTR86P25355 563 aa5.19□□□□□ -1.58
SHM1YBR263W LDB16P25587 256 aa5.19□□□□□ -1.58
SHM1YBR263W NTG1P31378 399 aa5.19□□□□□ -1.58
SHM1YBR263W ORC2P32833 620 aa5.19□□□□□ -1.58
SHM1YBR263W ARC19P33204 171 aaKnown RBP5.19□□□□□ -1.58
SHM1YBR263W SWH1P35845 1188 aa5.19□□□□□ -1.58
SHM1YBR263W VPS51P36116 164 aa5.19□□□□□ -1.58
SHM1YBR263W SWD1P39706 426 aa5.19□□□□□ -1.58
SHM1YBR263W RBG1P39729 369 aa5.19□□□□□ -1.58
SHM1YBR263W RPS26AP39938 119 aaKnown RBP5.19□□□□□ -1.58
SHM1YBR263W RPS26BP39939 119 aaKnown RBP5.19□□□□□ -1.58
SHM1YBR263W CUP9P41817 306 aa5.19□□□□□ -1.58
SHM1YBR263W SNO3P43544 222 aa5.19□□□□□ -1.58
SHM1YBR263W IKS1P47042 667 aa5.19□□□□□ -1.58
SHM1YBR263W AAD10P47182 288 aa5.19□□□□□ -1.58
SHM1YBR263W TOM22P49334 152 aa5.19□□□□□ -1.58
SHM1YBR263W PHO23P50947 330 aa5.19□□□□□ -1.58
SHM1YBR263W YGR016WP53209 190 aa5.19□□□□□ -1.58
SHM1YBR263W RNH70P53331 553 aa5.19□□□□□ -1.58
SHM1YBR263W PXR1P53335 271 aaPredicted RBP5.19□□□□□ -1.58
SHM1YBR263W YNL181WP53878 407 aa5.19□□□□□ -1.58
SHM1YBR263W RSC9Q03124 581 aa5.19□□□□□ -1.58
SHM1YBR263W HFD1Q04458 532 aa5.19□□□□□ -1.58
SHM1YBR263W NAT4Q04751 285 aa5.19□□□□□ -1.58
SHM1YBR263W MDM30Q05930 598 aa5.19□□□□□ -1.58
SHM1YBR263W YLR224WQ05947 369 aa5.19□□□□□ -1.58
SHM1YBR263W MRL1Q06815 381 aa5.19□□□□□ -1.58
SHM1YBR263W REX3Q12090 404 aa5.19□□□□□ -1.58
SHM1YBR263W NUM1Q00402 2748 aa5.18□□□□□ -1.58
SHM1YBR263W YSF3P0C074 85 aaPredicted RBP5.18□□□□□ -1.58
SHM1YBR263W BAR1P12630 587 aa5.18□□□□□ -1.58
SHM1YBR263W DMC1P25453 334 aa5.18□□□□□ -1.58
SHM1YBR263W YBR139WP38109 508 aa5.18□□□□□ -1.58
SHM1YBR263W IFA38P38286 347 aa5.18□□□□□ -1.58
SHM1YBR263W MED8P38304 223 aa5.18□□□□□ -1.58
SHM1YBR263W BIG1P38813 335 aa5.18□□□□□ -1.58
SHM1YBR263W ANS1P38832 159 aa5.18□□□□□ -1.58
SHM1YBR263W VHR1P40522 640 aa5.18□□□□□ -1.58
SHM1YBR263W MPH1P40562 993 aa5.18□□□□□ -1.58
SHM1YBR263W YGR201CP42936 225 aa5.18□□□□□ -1.58
SHM1YBR263W YJR141WP47172 347 aaPredicted RBP5.18□□□□□ -1.58
SHM1YBR263W OCA1P50946 238 aaPredicted RBP5.18□□□□□ -1.58
SHM1YBR263W MPA43P53583 542 aaPredicted RBP5.18□□□□□ -1.58
SHM1YBR263W MTQ1P53944 314 aa5.18□□□□□ -1.58
SHM1YBR263W SKI8Q02793 397 aaPredicted RBP5.18□□□□□ -1.58
SHM1YBR263W CTL1Q03220 320 aaKnown RBP5.18□□□□□ -1.58
SHM1YBR263W RIM13Q03792 727 aa5.18□□□□□ -1.58
SHM1YBR263W REH1Q06709 432 aa5.18□□□□□ -1.58
SHM1YBR263W AKR2Q12013 749 aa5.18□□□□□ -1.58
SHM1YBR263W TPO4Q12256 659 aa5.18□□□□□ -1.58
SHM1YBR263W PSY3Q12318 242 aa5.18□□□□□ -1.58
SHM1YBR263W RPS21BQ3E754 87 aaKnown RBP5.18□□□□□ -1.58
SHM1YBR263W DBP3P20447 523 aaKnown RBP5.17□□□□□ -1.58
SHM1YBR263W GSH1P32477 678 aa5.17□□□□□ -1.58
SHM1YBR263W AST1P35183 429 aa5.17□□□□□ -1.58
SHM1YBR263W YOR062CP36025 268 aa5.17□□□□□ -1.58
SHM1YBR263W AGP3P43548 558 aa5.17□□□□□ -1.58
SHM1YBR263W FMP33P46998 180 aa5.17□□□□□ -1.58
SHM1YBR263W APS3P47064 194 aa5.17□□□□□ -1.58
SHM1YBR263W ILM1P47155 203 aa5.17□□□□□ -1.58
SHM1YBR263W MRK1P50873 501 aa5.17□□□□□ -1.58
SHM1YBR263W RMR1P53060 241 aa5.17□□□□□ -1.58
SHM1YBR263W INP1Q03694 420 aa5.17□□□□□ -1.58
SHM1YBR263W DBP9Q06218 594 aaKnown RBP5.17□□□□□ -1.58
SHM1YBR263W ARO10Q06408 635 aa5.17□□□□□ -1.58
SHM1YBR263W RAX1Q08760 435 aa5.17□□□□□ -1.58
SHM1YBR263W SFM1Q12314 213 aa5.17□□□□□ -1.58
SHM1YBR263W PSF1Q12488 208 aa5.17□□□□□ -1.58
SHM1YBR263W PAR32Q12515 295 aaKnown RBP5.17□□□□□ -1.58
SHM1YBR263W YBR056W-AI2HB52 66 aa5.16□□□□□ -1.58
SHM1YBR263W HMG1P12683 1054 aa5.16□□□□□ -1.58
SHM1YBR263W SNF4P12904 322 aa5.16□□□□□ -1.58
SHM1YBR263W YCK1P23291 538 aa5.16□□□□□ -1.58
SHM1YBR263W GRR1P24814 1151 aa5.16□□□□□ -1.58
SHM1YBR263W CPR3P25719 182 aa5.16□□□□□ -1.58
SHM1YBR263W BUD14P27637 709 aa5.16□□□□□ -1.58
SHM1YBR263W LYP1P32487 611 aa5.16□□□□□ -1.58
SHM1YBR263W ZUO1P32527 433 aaKnown RBP5.16□□□□□ -1.58
SHM1YBR263W GDH2P33327 1092 aaKnown RBP5.16□□□□□ -1.58
SHM1YBR263W SEF1P34228 1148 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms