RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	YHB1	P39676	399 aa	Known RBP	3.94	□□□□□ -1.78
SLX1	YBR228W	COA1	P40452	197 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	VMA13	P41807	478 aa	Known RBP	3.94	□□□□□ -1.78
SLX1	YBR228W	PTR3	P43606	678 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	COQ5	P49017	307 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	YGL108C	P53139	140 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	CLD1	P53264	445 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	WSC2	P53832	503 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	IBD2	P53892	351 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	SUB1	P54000	292 aa	Known RBP	3.94	□□□□□ -1.78
SLX1	YBR228W	CCE1	Q03702	353 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	ARX1	Q03862	593 aa	Known RBP	3.94	□□□□□ -1.78
SLX1	YBR228W	YOL019W	Q08157	551 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	YOR012W	Q12351	137 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	TEL1	P38110	2787 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	SEM1	O94742	89 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	YKR104W	P0CE69	306 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	YAR066W	P0CX18	203 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	YHR214W	P0CX19	203 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	NMT1	P14743	455 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	ART10	P18634	518 aa	Known RBP	3.93	□□□□□ -1.78
SLX1	YBR228W	PHO84	P25297	587 aa	Known RBP	3.93	□□□□□ -1.78
SLX1	YBR228W	ADH7	P25377	361 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	SLC1	P33333	303 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	TCD2	P36101	447 aa	Known RBP	3.93	□□□□□ -1.78
SLX1	YBR228W	YHR045W	P38775	560 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	MEP1	P40260	492 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	UTP18	P40362	594 aa	Predicted RBP	3.93	□□□□□ -1.78
SLX1	YBR228W	YRB1	P41920	201 aa	Known RBP	3.93	□□□□□ -1.78
SLX1	YBR228W	YFR018C	P43599	363 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	MRM2	P53123	320 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	EFM5	P53200	248 aa	Known RBP	3.93	□□□□□ -1.78
SLX1	YBR228W	INN1	P53901	409 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	LSM3	P57743	89 aa	Known RBP	3.93	□□□□□ -1.78
SLX1	YBR228W	GTR1	Q00582	310 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	EMI1	Q04406	187 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	RIF2	Q06208	395 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	SAM4	Q08985	325 aa	Known RBP	3.93	□□□□□ -1.78
SLX1	YBR228W	NAG1	Q8TGN9	163 aa		3.93	□□□□□ -1.78
SLX1	YBR228W	SLH1	P53327	1967 aa	Known RBP	3.93	□□□□□ -1.78
SLX1	YBR228W	CDC21	P06785	304 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	FUM1	P08417	488 aa	Known RBP	3.92	□□□□□ -1.78
SLX1	YBR228W	POL30	P15873	258 aa	Known RBP	3.92	□□□□□ -1.78
SLX1	YBR228W	EXO70	P19658	623 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	YSR3	P23501	404 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	CIN8	P27895	1000 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	DEP1	P31385	405 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	ATP11	P32453	318 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	YPT52	P36018	234 aa	Known RBP	3.92	□□□□□ -1.78
SLX1	YBR228W	PMU1	P36069	295 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	RFC3	P38629	340 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	UTP9	P38882	575 aa	Known RBP	3.92	□□□□□ -1.78
SLX1	YBR228W	BAT1	P38891	393 aa	Known RBP	3.92	□□□□□ -1.78
SLX1	YBR228W	LSM5	P40089	93 aa	Known RBP	3.92	□□□□□ -1.78
SLX1	YBR228W	YJR154W	P47181	346 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	SHY1	P53266	389 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	SLM2	P53955	656 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	YPL113C	Q02961	396 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	GAS3	Q03655	524 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	FMN1	Q03778	218 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	SNO4	Q04902	237 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	HEL2	Q05580	639 aa	Known RBP	3.92	□□□□□ -1.78
SLX1	YBR228W	HSP33	Q08914	237 aa	Known RBP	3.92	□□□□□ -1.78
SLX1	YBR228W	HSP32	Q08992	237 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	VPS68	Q12016	184 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	PST1	Q12355	444 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	YCL021W-A	Q96VH3	125 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	MSB2	P32334	1306 aa		3.92	□□□□□ -1.78
SLX1	YBR228W	INH1	P01097	85 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	SPT15	P13393	240 aa	Known RBP	3.91	□□□□□ -1.78
SLX1	YBR228W	MET8	P15807	274 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	SGV1	P23293	657 aa	Known RBP	3.91	□□□□□ -1.78
SLX1	YBR228W	TOA1	P32773	286 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	MTR2	P34232	184 aa	Known RBP	3.91	□□□□□ -1.78
SLX1	YBR228W	SRX1	P36077	127 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	SOL2	P37262	315 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	WSC4	P38739	605 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	PFS1	P38872	237 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	CCT6	P39079	546 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	NPT1	P39683	429 aa	Known RBP	3.91	□□□□□ -1.78
SLX1	YBR228W	YEL073C	P39974	107 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	YER010C	P40011	234 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	TIF34	P40217	347 aa	Known RBP	3.91	□□□□□ -1.78
SLX1	YBR228W	TMA22	P47089	198 aa	Predicted RBP	3.91	□□□□□ -1.78
SLX1	YBR228W	BIR1	P47134	954 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	GTR2	P53290	341 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	NOP19	P53317	196 aa	Predicted RBP	3.91	□□□□□ -1.78
SLX1	YBR228W	ZRG17	P53735	605 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	YML131W	Q03102	365 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	YMR102C	Q03177	834 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	BCH1	Q05029	724 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	HFA1	P32874	2273 aa		3.91	□□□□□ -1.78
SLX1	YBR228W	SPT3	P06844	337 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	COS2	P0CX12	379 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	COS3	P0CX13	379 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	RSR1	P13856	272 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	CLB1	P24868	471 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	RER1	P25560	188 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	BUB2	P26448	306 aa	Predicted RBP	3.9	□□□□□ -1.79
SLX1	YBR228W	RAD14	P28519	371 aa		3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms