RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W PEX10Q05568 337 aa1.6□□□□□ -2.15
VPS15YBR097W MDM30Q05930 598 aa1.6□□□□□ -2.15
VPS15YBR097W TDA5Q06417 326 aaKnown RBP1.6□□□□□ -2.15
VPS15YBR097W MCH1Q07376 486 aa1.6□□□□□ -2.15
VPS15YBR097W YLR040CQ07988 224 aa1.6□□□□□ -2.15
VPS15YBR097W YOL024WQ08172 172 aa1.6□□□□□ -2.15
VPS15YBR097W SYC1Q08553 188 aaPredicted RBP1.6□□□□□ -2.15
VPS15YBR097W YDL206WQ12424 762 aa1.6□□□□□ -2.15
VPS15YBR097W SPE4Q12455 300 aa1.6□□□□□ -2.15
VPS15YBR097W FIG2P25653 1609 aa1.6□□□□□ -2.15
VPS15YBR097W PHO5P00635 467 aa1.59□□□□□ -2.15
VPS15YBR097W PUT4P15380 627 aa1.59□□□□□ -2.15
VPS15YBR097W APA2P22108 325 aa1.59□□□□□ -2.15
VPS15YBR097W RPD3P32561 433 aa1.59□□□□□ -2.15
VPS15YBR097W UTR4P32626 227 aa1.59□□□□□ -2.15
VPS15YBR097W COT1P32798 439 aa1.59□□□□□ -2.15
VPS15YBR097W VPS17P32913 551 aa1.59□□□□□ -2.15
VPS15YBR097W SGE1P33335 543 aa1.59□□□□□ -2.15
VPS15YBR097W PRP18P33411 251 aaPredicted RBP1.59□□□□□ -2.15
VPS15YBR097W SDH3P33421 198 aa1.59□□□□□ -2.15
VPS15YBR097W STE13P33894 931 aa1.59□□□□□ -2.15
VPS15YBR097W AST1P35183 429 aa1.59□□□□□ -2.15
VPS15YBR097W ADE17P38009 592 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W MRP21P38175 177 aa1.59□□□□□ -2.15
VPS15YBR097W EXO5P38289 585 aa1.59□□□□□ -2.15
VPS15YBR097W PCL5P38794 229 aa1.59□□□□□ -2.15
VPS15YBR097W WSS1P38838 269 aa1.59□□□□□ -2.15
VPS15YBR097W RPB11P38902 120 aa1.59□□□□□ -2.15
VPS15YBR097W HXT9P40885 567 aa1.59□□□□□ -2.15
VPS15YBR097W ALD2P47771 506 aa1.59□□□□□ -2.15
VPS15YBR097W MGA1P53050 456 aa1.59□□□□□ -2.15
VPS15YBR097W YGR168CP53293 376 aa1.59□□□□□ -2.15
VPS15YBR097W GND2P53319 492 aa1.59□□□□□ -2.15
VPS15YBR097W HST3P53687 447 aa1.59□□□□□ -2.15
VPS15YBR097W ECM9Q02202 377 aa1.59□□□□□ -2.15
VPS15YBR097W YMR166CQ03829 368 aa1.59□□□□□ -2.15
VPS15YBR097W TIF35Q04067 274 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W HRD3Q05787 833 aa1.59□□□□□ -2.15
VPS15YBR097W YDL176WQ12027 708 aa1.59□□□□□ -2.15
VPS15YBR097W RTK1Q12100 620 aaPredicted RBP1.59□□□□□ -2.15
VPS15YBR097W RFM1Q12192 310 aa1.59□□□□□ -2.15
VPS15YBR097W JID1Q12350 301 aa1.59□□□□□ -2.15
VPS15YBR097W MPD1Q12404 318 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W HBN1Q96VH4 193 aa1.59□□□□□ -2.15
VPS15YBR097W YAL064W-BO13512 126 aa1.59□□□□□ -2.15
VPS15YBR097W YBR085C-AO43137 85 aa1.59□□□□□ -2.15
VPS15YBR097W URA3P03962 267 aa1.59□□□□□ -2.15
VPS15YBR097W GAL1P04385 528 aa1.59□□□□□ -2.15
VPS15YBR097W DED1P06634 604 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W ADK1P07170 222 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W ADH3P07246 375 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W HEM1P09950 548 aaPredicted RBP1.59□□□□□ -2.15
VPS15YBR097W NHP6AP11632 93 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W TRK1P12685 1235 aa1.59□□□□□ -2.15
VPS15YBR097W CBS1P14066 229 aa1.59□□□□□ -2.15
VPS15YBR097W ERD2P18414 219 aa1.59□□□□□ -2.15
VPS15YBR097W FUR1P18562 216 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W ARG1P22768 420 aa1.59□□□□□ -2.15
VPS15YBR097W AMS1P22855 1083 aa1.59□□□□□ -2.15
VPS15YBR097W CNE1P27825 502 aa1.59□□□□□ -2.15
VPS15YBR097W HYM1P32464 399 aa1.59□□□□□ -2.15
VPS15YBR097W SLC1P33333 303 aa1.59□□□□□ -2.15
VPS15YBR097W PTC1P35182 281 aa1.59□□□□□ -2.15
VPS15YBR097W MRPL28P36527 147 aa1.59□□□□□ -2.15
VPS15YBR097W APN2P38207 520 aa1.59□□□□□ -2.15
VPS15YBR097W SLM4P38247 162 aa1.59□□□□□ -2.15
VPS15YBR097W YHR033WP38690 423 aa1.59□□□□□ -2.15
VPS15YBR097W CRG1P38892 291 aaRIP-Chip data1.59□□□□□ -2.15 RIP-Chip
VPS15YBR097W HMF1P40037 129 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W LRO1P40345 661 aa1.59□□□□□ -2.15
VPS15YBR097W YIL165CP40446 119 aa1.59□□□□□ -2.15
VPS15YBR097W QDR2P40474 542 aa1.59□□□□□ -2.15
VPS15YBR097W QRI7P43122 407 aa1.59□□□□□ -2.15
VPS15YBR097W IRC7P43623 340 aa1.59□□□□□ -2.15
VPS15YBR097W FLC3P53121 802 aa1.59□□□□□ -2.15
VPS15YBR097W PGA1P53896 198 aa1.59□□□□□ -2.15
VPS15YBR097W RPL21AQ02753 160 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W EEB1Q02891 456 aa1.59□□□□□ -2.15
VPS15YBR097W NGL2Q03264 515 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W YDR239CQ03780 787 aa1.59□□□□□ -2.15
VPS15YBR097W HED1Q03937 162 aa1.59□□□□□ -2.15
VPS15YBR097W CIA1Q05583 330 aa1.59□□□□□ -2.15
VPS15YBR097W PHO92Q06390 306 aa1.59□□□□□ -2.15
VPS15YBR097W NAT3Q06504 195 aa1.59□□□□□ -2.15
VPS15YBR097W CDC73Q06697 393 aa1.59□□□□□ -2.15
VPS15YBR097W SAM4Q08985 325 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W YPL066WQ12194 479 aa1.59□□□□□ -2.15
VPS15YBR097W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
VPS15YBR097W YDL180WQ12301 547 aa1.59□□□□□ -2.15
VPS15YBR097W PFK27Q12471 397 aaPredicted RBP1.59□□□□□ -2.15
VPS15YBR097W RPL21BQ12672 160 aaKnown RBP1.59□□□□□ -2.15
VPS15YBR097W FSH3Q99369 266 aa1.59□□□□□ -2.15
VPS15YBR097W TDH2P00358 332 aaKnown RBP1.59□□□□□ -2.16
VPS15YBR097W TDH3P00359 332 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16not detected
VPS15YBR097W CAN1P04817 590 aa1.59□□□□□ -2.16
VPS15YBR097W COS2P0CX12 379 aa1.59□□□□□ -2.16
VPS15YBR097W COS3P0CX13 379 aa1.59□□□□□ -2.16
VPS15YBR097W RPS18AP0CX55 146 aaKnown RBP1.59□□□□□ -2.16
VPS15YBR097W RPS18BP0CX56 146 aaPredicted RBP1.59□□□□□ -2.16
VPS15YBR097W NHP6BP11633 99 aaKnown RBP1.59□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms