RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YNR062CP53748 327 aa2.09□□□□□ -2.07
NUP170YBL079W ABZ2Q03266 374 aa2.09□□□□□ -2.07
NUP170YBL079W UGO1Q03327 502 aa2.09□□□□□ -2.07
NUP170YBL079W CAC2Q04199 468 aa2.09□□□□□ -2.07
NUP170YBL079W YMR087WQ04299 284 aa2.09□□□□□ -2.07
NUP170YBL079W VBA4Q04602 768 aaKnown RBP2.09□□□□□ -2.07
NUP170YBL079W YDL109CQ12103 647 aa2.09□□□□□ -2.07
NUP170YBL079W USB1Q12208 290 aaKnown RBP2.09□□□□□ -2.07
NUP170YBL079W FSH3Q99369 266 aa2.09□□□□□ -2.07
NUP170YBL079W RAS2P01120 322 aaKnown RBP2.09□□□□□ -2.08
NUP170YBL079W SEC2P17065 759 aa2.09□□□□□ -2.08
NUP170YBL079W HNM1P19807 563 aa2.09□□□□□ -2.08
NUP170YBL079W MRPS28P21771 286 aa2.09□□□□□ -2.08
NUP170YBL079W SAN1P22470 610 aa2.09□□□□□ -2.08
NUP170YBL079W RPS5P26783 225 aaKnown RBP2.09□□□□□ -2.08
NUP170YBL079W TOD6P34219 525 aa2.09□□□□□ -2.08
NUP170YBL079W YHL037CP38733 133 aa2.09□□□□□ -2.08
NUP170YBL079W ECM10P39987 644 aa2.09□□□□□ -2.08
NUP170YBL079W GCN20P43535 752 aaKnown RBP2.09□□□□□ -2.08
NUP170YBL079W CAB4P53332 305 aa2.09□□□□□ -2.08
NUP170YBL079W GIM3P53900 129 aa2.09□□□□□ -2.08
NUP170YBL079W YMR099CQ03161 297 aaKnown RBP2.09□□□□□ -2.08
NUP170YBL079W YPR098CQ06089 161 aa2.09□□□□□ -2.08
NUP170YBL079W MRPL51Q06090 140 aaPredicted RBP2.09□□□□□ -2.08
NUP170YBL079W GSH2Q08220 491 aa2.09□□□□□ -2.08
NUP170YBL079W YPR064WQ12492 139 aa2.09□□□□□ -2.08
NUP170YBL079W STE2D6VTK4 431 aa2.09□□□□□ -2.08
NUP170YBL079W ERG4P25340 473 aa2.09□□□□□ -2.08
NUP170YBL079W MXR2P25566 168 aa2.09□□□□□ -2.08
NUP170YBL079W MRPL9P31334 269 aa2.09□□□□□ -2.08
NUP170YBL079W ZUO1P32527 433 aaKnown RBP2.09□□□□□ -2.08
NUP170YBL079W TMA19P35691 167 aaKnown RBP2.09□□□□□ -2.08
NUP170YBL079W YKL071WP36086 256 aa2.09□□□□□ -2.08
NUP170YBL079W ARC40P38328 384 aaKnown RBP2.09□□□□□ -2.08
NUP170YBL079W GAB1P41733 394 aa2.09□□□□□ -2.08
NUP170YBL079W YKR005CQ02203 525 aa2.09□□□□□ -2.08
NUP170YBL079W SRL4Q03085 281 aa2.09□□□□□ -2.08
NUP170YBL079W RFU1Q08003 200 aa2.09□□□□□ -2.08
NUP170YBL079W KIN28P06242 306 aa2.08□□□□□ -2.08
NUP170YBL079W ZWF1P11412 505 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W SRY1P36007 326 aa2.08□□□□□ -2.08
NUP170YBL079W FIG1P38224 298 aa2.08□□□□□ -2.08
NUP170YBL079W ARO9P38840 513 aaPredicted RBP2.08□□□□□ -2.08
NUP170YBL079W RCY1P39531 840 aa2.08□□□□□ -2.08
NUP170YBL079W PPT1P53043 513 aa2.08□□□□□ -2.08
NUP170YBL079W TAF12Q03761 539 aa2.08□□□□□ -2.08
NUP170YBL079W TMA10Q06177 86 aa2.08□□□□□ -2.08
NUP170YBL079W MET3P08536 511 aa2.08□□□□□ -2.08
NUP170YBL079W YCL049CP25577 312 aa2.08□□□□□ -2.08
NUP170YBL079W MNS1P32906 549 aa2.08□□□□□ -2.08
NUP170YBL079W CLG1P35190 452 aa2.08□□□□□ -2.08
NUP170YBL079W SPC42P36094 363 aa2.08□□□□□ -2.08
NUP170YBL079W TAT1P38085 619 aa2.08□□□□□ -2.08
NUP170YBL079W DLD3P39976 496 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W HXT9P40885 567 aa2.08□□□□□ -2.08
NUP170YBL079W CHA4P43634 648 aa2.08□□□□□ -2.08
NUP170YBL079W DPB11P47027 764 aaPredicted RBP2.08□□□□□ -2.08
NUP170YBL079W BUD32P53323 261 aa2.08□□□□□ -2.08
NUP170YBL079W HXT11P54862 567 aa2.08□□□□□ -2.08
NUP170YBL079W ARG5,6Q01217 863 aa2.08□□□□□ -2.08
NUP170YBL079W RDL2Q08742 149 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W YLR053CQ12026 108 aa2.08□□□□□ -2.08
NUP170YBL079W YPL245WQ12179 454 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W PST1Q12355 444 aa2.08□□□□□ -2.08
NUP170YBL079W YBL029C-AQ3E756 94 aa2.08□□□□□ -2.08
NUP170YBL079W CCW14O13547 238 aa2.08□□□□□ -2.08
NUP170YBL079W SCEIP03882 235 aa2.08□□□□□ -2.08
NUP170YBL079W YOL163WP0CF20 169 aa2.08□□□□□ -2.08
NUP170YBL079W RPL20AP0CX23 172 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W RPL20BP0CX24 172 aaPredicted RBP2.08□□□□□ -2.08
NUP170YBL079W TRM1P15565 570 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W ITR1P30605 584 aa2.08□□□□□ -2.08
NUP170YBL079W HYM1P32464 399 aa2.08□□□□□ -2.08
NUP170YBL079W GDH2P33327 1092 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W NUP120P35729 1037 aa2.08□□□□□ -2.08
NUP170YBL079W YBR241CP38142 488 aa2.08□□□□□ -2.08
NUP170YBL079W HEK2P38199 381 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08 RIP-Chip
NUP170YBL079W ECM1P39715 212 aa2.08□□□□□ -2.08
NUP170YBL079W ALG5P40350 334 aa2.08□□□□□ -2.08
NUP170YBL079W SEC9P40357 651 aa2.08□□□□□ -2.08
NUP170YBL079W MOB2P43563 287 aa2.08□□□□□ -2.08
NUP170YBL079W SAM37P50110 327 aa2.08□□□□□ -2.08
NUP170YBL079W ACS2P52910 683 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W HMO1Q03973 246 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W RSC58Q07979 502 aa2.08□□□□□ -2.08
NUP170YBL079W AVO1Q08236 1176 aa2.08□□□□□ -2.08
NUP170YBL079W THP3Q12049 470 aaKnown RBP2.08□□□□□ -2.08
NUP170YBL079W SET6Q12529 373 aa2.08□□□□□ -2.08
NUP170YBL079W PHO81P17442 1178 aa2.07□□□□□ -2.08
NUP170YBL079W MAK32P23060 363 aa2.07□□□□□ -2.08
NUP170YBL079W RNA14P25298 677 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W YCR101CP25607 182 aa2.07□□□□□ -2.08
NUP170YBL079W LAS1P36146 502 aaPredicted RBP2.07□□□□□ -2.08
NUP170YBL079W FET3P38993 636 aa2.07□□□□□ -2.08
NUP170YBL079W GDI1P39958 451 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W ARB1P40024 610 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W YIL029CP40538 142 aa2.07□□□□□ -2.08
NUP170YBL079W ARF3P40994 183 aaRIP-Chip data2.07□□□□□ -2.08not detected
NUP170YBL079W GAT1P43574 510 aa2.07□□□□□ -2.08
NUP170YBL079W YNR040WP53736 256 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms