RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCR1	SCR1	NAN1	Q02931	896 aa	Known RBP	13.37	□□□□□ -0.27
SCR1	SCR1	RRN5	Q02983	363 aa		13.37	□□□□□ -0.27
SCR1	SCR1	SDC1	Q03323	175 aa		13.37	□□□□□ -0.27
SCR1	SCR1	RSN1	Q03516	953 aa		13.37	□□□□□ -0.27
SCR1	SCR1	EKI1	Q03764	534 aa		13.37	□□□□□ -0.27
SCR1	SCR1	NOP12	Q08208	459 aa	Known RBP	13.37	□□□□□ -0.27
SCR1	SCR1	BAG7	Q12128	409 aa		13.37	□□□□□ -0.27
SCR1	SCR1	NPC2	Q12408	173 aa		13.37	□□□□□ -0.27
SCR1	SCR1	MRX4	Q12467	430 aa		13.37	□□□□□ -0.27
SCR1	SCR1	EHD3	P28817	500 aa		13.36	□□□□□ -0.27
SCR1	SCR1	YHR097C	P38809	366 aa	Known RBP	13.36	□□□□□ -0.27
SCR1	SCR1	MPM1	P40364	252 aa		13.36	□□□□□ -0.27
SCR1	SCR1	TOS2	P50078	622 aa		13.36	□□□□□ -0.27
SCR1	SCR1	ENB1	Q08299	606 aa		13.36	□□□□□ -0.27
SCR1	SCR1	MCP1	Q12106	302 aa		13.36	□□□□□ -0.27
SCR1	SCR1	CLB4	P24871	460 aa		13.35	□□□□□ -0.27
SCR1	SCR1	HIS7	P33734	552 aa	Known RBP	13.35	□□□□□ -0.27
SCR1	SCR1	LHS1	P36016	881 aa		13.35	□□□□□ -0.27
SCR1	SCR1	YHL012W	P38709	493 aa		13.35	□□□□□ -0.27
SCR1	SCR1	DIM1	P41819	318 aa	Known RBP	13.35	□□□□□ -0.27
SCR1	SCR1	NOP9	P47077	666 aa	Known RBP	13.35	□□□□□ -0.27
SCR1	SCR1	GAS2	Q06135	555 aa		13.35	□□□□□ -0.27
SCR1	SCR1	FLO9	P39712	1322 aa		13.35	□□□□□ -0.27
SCR1	SCR1	YOL163W	P0CF20	169 aa		13.34	□□□□□ -0.27
SCR1	SCR1	ASF2	P32448	525 aa	Predicted RBP	13.34	□□□□□ -0.27
SCR1	SCR1	MTC4	P38335	694 aa	Known RBP	13.34	□□□□□ -0.27
SCR1	SCR1	PDX1	P16451	410 aa		13.33	□□□□□ -0.28
SCR1	SCR1	PET9	P18239	318 aa	Known RBP	13.33	□□□□□ -0.28
SCR1	SCR1	YEF1	P32622	495 aa		13.33	□□□□□ -0.28
SCR1	SCR1	GDH2	P33327	1092 aa	Known RBP	13.33	□□□□□ -0.28
SCR1	SCR1	HSV2	P50079	448 aa	Predicted RBP	13.33	□□□□□ -0.28
SCR1	SCR1	ALG12	P53730	551 aa		13.33	□□□□□ -0.28
SCR1	SCR1	YLR352W	Q06479	807 aa		13.33	□□□□□ -0.28
SCR1	SCR1	ERD2	P18414	219 aa		13.32	□□□□□ -0.28
SCR1	SCR1	SAC1	P32368	623 aa	Known RBP	13.32	□□□□□ -0.28
SCR1	SCR1	HIR2	P32480	875 aa		13.32	□□□□□ -0.28
SCR1	SCR1	XBP1	P40489	647 aa		13.32	□□□□□ -0.28
SCR1	SCR1	TPS1	Q00764	495 aa	Known RBP	13.32	□□□□□ -0.28
SCR1	SCR1	YPL039W	Q03080	316 aa		13.32	□□□□□ -0.28
SCR1	SCR1	NDL1	Q06568	189 aa		13.32	□□□□□ -0.28
SCR1	SCR1	VPS36	Q06696	566 aa		13.32	□□□□□ -0.28
SCR1	SCR1	YDL109C	Q12103	647 aa		13.32	□□□□□ -0.28
SCR1	SCR1	WTM2	Q12206	467 aa		13.32	□□□□□ -0.28
SCR1	SCR1	SWM1	Q12379	170 aa		13.32	□□□□□ -0.28
SCR1	SCR1	NTG1	P31378	399 aa		13.31	□□□□□ -0.28
SCR1	SCR1	RPN2	P32565	945 aa	Known RBP	13.31	□□□□□ -0.28
SCR1	SCR1	HCS1	P34243	683 aa		13.31	□□□□□ -0.28
SCR1	SCR1	YFR054C	P43622	192 aa		13.31	□□□□□ -0.28
SCR1	SCR1	YGR066C	P53242	292 aa		13.31	□□□□□ -0.28
SCR1	SCR1	SPR6	Q01684	191 aa		13.31	□□□□□ -0.28
SCR1	SCR1	SNX41	Q04053	625 aa		13.31	□□□□□ -0.28
SCR1	SCR1	RNH202	Q05635	350 aa		13.31	□□□□□ -0.28
SCR1	SCR1	AVO1	Q08236	1176 aa		13.31	□□□□□ -0.28
SCR1	SCR1	CBP6	P07253	162 aa	Predicted RBP	13.3	□□□□□ -0.28
SCR1	SCR1	SSA3	P09435	649 aa	Known RBP	13.3	□□□□□ -0.28
SCR1	SCR1	REC107	P21651	314 aa		13.3	□□□□□ -0.28
SCR1	SCR1	YHR180W	P38868	163 aa		13.3	□□□□□ -0.28
SCR1	SCR1	SHO1	P40073	367 aa		13.3	□□□□□ -0.28
SCR1	SCR1	COG3	P40094	801 aa		13.3	□□□□□ -0.28
SCR1	SCR1	YIL169C	P40442	995 aa		13.3	□□□□□ -0.28
SCR1	SCR1	YJR098C	P47139	656 aa		13.3	□□□□□ -0.28
SCR1	SCR1	YJR142W	P47173	342 aa		13.3	□□□□□ -0.28
SCR1	SCR1	HRI1	Q05905	244 aa	Known RBP	13.3	□□□□□ -0.28
SCR1	SCR1	EMG1	Q06287	252 aa	Known RBP	13.3	□□□□□ -0.28
SCR1	SCR1	YOL159C-A	Q3E769	90 aa		13.3	□□□□□ -0.28
SCR1	SCR1	DET1	Q99288	334 aa	Known RBP	13.3	□□□□□ -0.28
SCR1	SCR1	AIM17	P23180	465 aa	Known RBP	13.29	□□□□□ -0.28
SCR1	SCR1	NFS1	P25374	497 aa		13.29	□□□□□ -0.28
SCR1	SCR1	PTC6	P25646	442 aa		13.29	□□□□□ -0.28
SCR1	SCR1	ITR2	P30606	609 aa		13.29	□□□□□ -0.28
SCR1	SCR1	DPH5	P32469	300 aa	Predicted RBP	13.29	□□□□□ -0.28
SCR1	SCR1	PDX3	P38075	228 aa	Known RBP	13.29	□□□□□ -0.28
SCR1	SCR1	HXT9	P40885	567 aa		13.29	□□□□□ -0.28
SCR1	SCR1	GCN20	P43535	752 aa	Known RBP	13.29	□□□□□ -0.28
SCR1	SCR1	IMD4	P50094	524 aa	Known RBP	13.29	□□□□□ -0.28
SCR1	SCR1	HXT11	P54862	567 aa		13.29	□□□□□ -0.28
SCR1	SCR1	COX20	Q04935	205 aa		13.29	□□□□□ -0.28
SCR1	SCR1	UTP21	Q06078	939 aa	Predicted RBP	13.29	□□□□□ -0.28
SCR1	SCR1	SYO1	Q07395	620 aa		13.29	□□□□□ -0.28
SCR1	SCR1	YPL225W	Q08971	146 aa	Known RBP	13.29	□□□□□ -0.28
SCR1	SCR1	YRA1	Q12159	226 aa	Known RBP	13.29	□□□□□ -0.28
SCR1	SCR1	APC2	Q12440	853 aa		13.29	□□□□□ -0.28
SCR1	SCR1	TIM9	O74700	87 aa		13.28	□□□□□ -0.28
SCR1	SCR1	CDC36	P06100	191 aa	Predicted RBP	13.28	□□□□□ -0.28
SCR1	SCR1	IDH1	P28834	360 aa	Known RBP RIP-Chip data	13.28	□□□□□ -0.28	not detected
SCR1	SCR1	SNC1	P31109	117 aa		13.28	□□□□□ -0.28
SCR1	SCR1	SLC1	P33333	303 aa		13.28	□□□□□ -0.28
SCR1	SCR1	RRP4	P38792	359 aa	Known RBP	13.28	□□□□□ -0.28
SCR1	SCR1	YHR219W	P38900	624 aa		13.28	□□□□□ -0.28
SCR1	SCR1	YIL166C	P40445	542 aa		13.28	□□□□□ -0.28
SCR1	SCR1	SYF2	P53277	215 aa	Predicted RBP	13.28	□□□□□ -0.28
SCR1	SCR1	YGR168C	P53293	376 aa		13.28	□□□□□ -0.28
SCR1	SCR1	YKR011C	Q02209	353 aa		13.28	□□□□□ -0.28
SCR1	SCR1	CDC4	P07834	779 aa		13.27	□□□□□ -0.29
SCR1	SCR1	UTR1	P21373	530 aa		13.27	□□□□□ -0.29
SCR1	SCR1	ECM15	P35195	104 aa		13.27	□□□□□ -0.29
SCR1	SCR1	SPC34	P36131	295 aa		13.27	□□□□□ -0.29
SCR1	SCR1	YNL208W	P40159	199 aa	Known RBP	13.27	□□□□□ -0.29
SCR1	SCR1	YFL066C	P43538	392 aa		13.27	□□□□□ -0.29
SCR1	SCR1	MEP3	P53390	489 aa		13.27	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms