RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TTC12Q9H892 705 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-228ENST00000641847 NFASCO94856 1347 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 DOCK5Q9H7D0 1870 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 A0A1W2PQ27 194 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 A0A1W2PQ64 194 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 A0A1W2PQD8 194 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 POTEMA6NI47 508 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 PP2D1A8MPX8 630 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 NKRFO15226 690 aaKnown RBP eCLIP10.53□□□□□ -0.72
PHGDH-228ENST00000641847 MAFGO15525 162 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 ATP9AO75110 1047 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 PSMD10O75832 226 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 IRS1P35568 1242 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 SPIRE1Q08AE8 756 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 SPECC1Q5M775 1068 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 ADALQ6DHV7 355 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 NCAPH2Q6IBW4 605 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 LRRC8DQ7L1W4 858 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 ERMP1Q7Z2K6 904 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 IGSF22Q8N9C0 903 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 FSIP1Q8NA03 581 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 SCFD2Q8WU76 684 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 AK8Q96MA6 479 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 UNC45AQ9H3U1 944 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 GOLPH3LQ9H4A5 285 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 TBC1D22BQ9NU19 505 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 CLDND1Q9NY35 253 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 FAM13BQ9NYF5 915 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 LRWD1Q9UFC0 647 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 TCEAL9Q9UHQ7 104 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 MUTYHQ9UIF7 546 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 PCDHA12Q9UN75 941 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 ZNF318Q5VUA4 2279 aa10.53□□□□□ -0.72
PHGDH-228ENST00000641847 RBM47A0AV96 593 aaKnown RBP10.52□□□□□ -0.73
PHGDH-228ENST00000641847 TMEM221A6NGB7 291 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 M0R296 226 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 DHX15O43143 795 aaKnown RBP10.52□□□□□ -0.73
PHGDH-228ENST00000641847 SORBS3O60504 671 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 ARIH2O95376 493 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 AMHP03971 560 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 PFKFB1P16118 471 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 CMA1P23946 247 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 TXLNAP40222 546 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 DEFB103AP81534 67 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 PPP2R5CQ13362 524 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 LY6KQ17RY6 165 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 FAM117BQ6P1L5 589 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 KCNV1Q6PIU1 500 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 TMCO2Q7Z6W1 182 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-228ENST00000641847 RNF135Q8IUD6 432 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 ERMNQ8TAM6 284 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 SNX29Q8TEQ0 813 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 ATOH1Q92858 354 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-228ENST00000641847 EPSTI1Q96J88 318 aa10.52□□□□□ -0.73
PHGDH-228ENST00000641847 NSUN3Q9H649 340 aaKnown RBP10.52□□□□□ -0.73
PHGDH-228ENST00000641847 JPH1Q9HDC5 661 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-228ENST00000641847 DDX41Q9UJV9 622 aaKnown RBP10.52□□□□□ -0.73
PHGDH-228ENST00000641847 FAM237AA0A1B0GTK4 181 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 A0A1B0GVL5 298 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 WDR64B1ANS9 1081 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 GGPS1O95749 300 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 MBD3O95983 291 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 CCNE2O96020 404 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 TXNP10599 105 aaKnown RBP10.51□□□□□ -0.73
PHGDH-228ENST00000641847 TGFB3P10600 412 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 LIG1P18858 919 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 PTGS1P23219 599 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 CDC25AP30304 524 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 UBA7P41226 1012 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 KRT76Q01546 638 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 SP2Q02086 613 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 SP4Q02446 784 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 GPM6BQ13491 265 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 NEDD9Q14511 834 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 PDIA5Q14554 519 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 TCEAL5Q5H9L2 206 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 IER5LQ5T953 404 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 KRT79Q5XKE5 535 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 B3GNT9Q6UX72 402 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 CCDC73Q6ZRK6 1079 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 TRIM67Q6ZTA4 783 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 USP49Q70CQ1 688 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 CABP7Q86V35 215 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 GIMAP8Q8ND71 665 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-228ENST00000641847 RASSF8Q8NHQ8 419 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 GPT2Q8TD30 523 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 SENP7Q9BQF6 1050 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 C17orf80Q9BSJ5 609 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 SLC9A2Q9UBY0 812 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 HPSEQ9Y251 543 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 CACNA1HO95180 2353 aa10.51□□□□□ -0.73
PHGDH-228ENST00000641847 A6NJR5 290 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 H3BNC9 293 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 EML1O00423 815 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 CXCL10P02778 98 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 NDUFA8P51970 172 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 JAK3P52333 1124 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 FAM160A1Q05DH4 1040 aa10.5□□□□□ -0.73
PHGDH-228ENST00000641847 KARSQ15046 597 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms