RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 MIA3Q5JRA6 1907 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 BAZ2BQ9UIF8 2168 aaKnown RBP9.4□□□□□ -0.91
SCARB2-226ENST00000640916 EVPLQ92817 2033 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 FASNP49327 2511 aaKnown RBP9.39□□□□□ -0.91
SCARB2-226ENST00000640916 FRMPD4Q14CM0 1322 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 KDM3AQ9Y4C1 1321 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 GSTTP1A0A1W2PQM5 241 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 N4BP1O75113 896 aaKnown RBP9.39□□□□□ -0.91
SCARB2-226ENST00000640916 FGAP02671 866 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 CFHP08603 1231 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 FGFR1P11362 822 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 LAG3P18627 525 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 SDHBP21912 280 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 CCND2P30279 289 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 FAM189BP81408 668 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 TBC1D8BQ0IIM8 1120 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 NEDD9Q14511 834 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 ACAP1Q15027 740 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 SLC35G1Q2M3R5 365 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 ATAT1Q5SQI0 421 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 ZC3H14Q6PJT7 736 aaKnown RBP9.39□□□□□ -0.91
SCARB2-226ENST00000640916 KCNT2Q6UVM3 1135 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 C1orf210Q8IVY1 113 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 RSAD2Q8WXG1 361 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 COL26A1Q96A83 441 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 CASD1Q96PB1 797 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 ZKSCAN3Q9BRR0 538 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 RTKNQ9BST9 563 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 CELF4Q9BZC1 486 aaKnown RBP9.39□□□□□ -0.91
SCARB2-226ENST00000640916 TBC1D17Q9HA65 648 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 CDHR5Q9HBB8 845 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 VAT1LQ9HCJ6 419 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 RGS18Q9NS28 235 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 FBXL21Q9UKT6 434 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 TRPV2Q9Y5S1 764 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 LAMA4Q16363 1823 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 ZZEF1O43149 2961 aa9.39□□□□□ -0.91
SCARB2-226ENST00000640916 EPCAMP16422 314 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 IBSPP21815 317 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-226ENST00000640916 MARK3P27448 753 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 TCF7P36402 384 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-226ENST00000640916 SP4Q02446 784 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 PAK2Q13177 524 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 COL9A3Q14050 684 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-226ENST00000640916 SPECC1Q5M775 1068 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 IER5Q5VY09 327 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 TMC7Q7Z402 723 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 STAG2Q8N3U4 1231 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 PI4K2BQ8TCG2 481 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 TMEM40Q8WWA1 233 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 ADAM2Q99965 735 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 FAM49AQ9H0Q0 323 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-226ENST00000640916 PARD6AQ9NPB6 346 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 TOMM22Q9NS69 142 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 RTEL1Q9NZ71 1219 aa9.38□□□□□ -0.91
SCARB2-226ENST00000640916 PUF60Q9UHX1 559 aaKnown RBP9.38□□□□□ -0.91
SCARB2-226ENST00000640916 PRR5-ARHGAP8B1AHC4 643 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 FIBPO43427 364 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 ATP9AO75110 1047 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 LRRN2O75325 713 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 INSRRP14616 1297 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 ARHGAP8P85298 464 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 SMC1AQ14683 1233 aaKnown RBP9.37□□□□□ -0.91
SCARB2-226ENST00000640916 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
SCARB2-226ENST00000640916 C6orf132Q5T0Z8 1188 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 PHLDB3Q6NSJ2 640 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 XRRA1Q6P2D8 792 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 TMC5Q6UXY8 1006 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 GPR149Q86SP6 731 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 FCHSD1Q86WN1 690 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 DGKHQ86XP1 1220 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 TBC1D10CQ8IV04 446 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 SLC39A11Q8N1S5 342 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 SAMD3Q8N6K7 520 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 CHAMP1Q96JM3 812 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 PCYT2Q99447 389 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 SENP7Q9BQF6 1050 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 AMNQ9BXJ7 453 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
SCARB2-226ENST00000640916 CA14Q9ULX7 337 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 NOC2LQ9Y3T9 749 aaKnown RBP9.37□□□□□ -0.91
SCARB2-226ENST00000640916 PCDHA2Q9Y5H9 948 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 PCDHA1Q9Y5I3 950 aa9.37□□□□□ -0.91
SCARB2-226ENST00000640916 NEDD4P46934 1319 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 KINO60870 393 aaKnown RBP9.36□□□□□ -0.91
SCARB2-226ENST00000640916 LILRB5O75023 590 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 HAND2P61296 217 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 IGBP1P78318 339 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 LMNB2Q03252 620 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 NFX1Q12986 1120 aaKnown RBP9.36□□□□□ -0.91
SCARB2-226ENST00000640916 DSC3Q14574 896 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 ZNF528Q3MIS6 628 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 ASPRV1Q53RT3 343 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 PPM1JQ5JR12 505 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 SMYD5Q6GMV2 418 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 SLC24A5Q71RS6 500 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 OTOP3Q7RTS5 596 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms