RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RAC1P63000 192 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 TFAP4Q01664 338 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 ACTN3Q08043 901 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 PRKG2Q13237 762 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 GALNT13Q8IUC8 556 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 KCNH5Q8NCM2 988 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 VPS39Q96JC1 886 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 NELL2Q99435 816 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 GMLQ99445 158 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SDHAF3Q9NRP4 125 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 CABP1Q9NZU7 370 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 MYO3BQ8WXR4 1341 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 CASZ1Q86V15 1759 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 ABCC8Q09428 1581 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 CACNB4O00305 520 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 RAD51BO15315 384 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 ADCY3O60266 1144 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 NOP14P78316 857 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 GSTO1P78417 241 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 DHX9Q08211 1270 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 DCAF17Q5H9S7 520 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 DEPDC1Q5TB30 811 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 TMC5Q6UXY8 1006 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 HOMER1Q86YM7 354 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 COLGALT2Q8IYK4 626 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SHCBP1Q8NEM2 672 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 INTS12Q96CB8 462 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 IQCDQ96DY2 449 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 NUDT12Q9BQG2 462 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 TUFT1Q9NNX1 390 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 TIMM22Q9Y584 194 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 CLUP10909 449 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 GZMAP12544 262 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 CCT5P48643 541 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 MDM2Q00987 491 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 KRT28Q7Z3Y7 464 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 ITPKCQ96DU7 683 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 DIABLOQ9NR28 239 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 HPF1Q9NWY4 346 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 TRAV6A0A075B6T7 132 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 MEFVO15553 781 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 FYNP06241 537 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 HSPA13P48723 471 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 TRPC3Q13507 836 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 ERCC6LQ2NKX8 1250 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 MINDY4Q4G0A6 757 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 B3GNT6Q6ZMB0 384 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 USP48Q86UV5 1035 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 RAVER1Q8IY67 606 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 DDHD1Q8NEL9 900 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SUPT20HQ8NEM7 779 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 NSMCE3Q96MG7 304 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 PLIN2Q99541 437 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 NDUFA13Q9P0J0 144 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SOX13Q9UN79 622 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 PCDHGA3Q9Y5H0 932 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 USH1CQ9Y6N9 552 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 AP1M2Q9Y6Q5 423 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 XRCC5P13010 732 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 LRRC41Q15345 812 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 RNASEH2BQ5TBB1 312 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 ANKS4BQ8N8V4 417 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 OLFM3Q96PB7 478 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 LMAN2LQ9H0V9 348 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SOGA1O94964 1423 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 KIF27Q86VH2 1401 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 NVLO15381 856 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 PALMO75781 387 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 OLFM2O95897 454 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 GDI1P31150 447 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 GDI2P50395 445 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 INHBCP55103 352 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 HSP90AA4PQ58FG1 418 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 RBM20Q5T481 1227 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 INTS3Q68E01 1043 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 MCTP1Q6DN14 999 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 LVRNQ6Q4G3 990 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 P3H2Q8IVL5 708 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 MMRN2Q9H8L6 949 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 IL1RAPL2Q9NP60 686 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SRP68Q9UHB9 627 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 EXOC6BQ9Y2D4 811 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 RTCBQ9Y3I0 505 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 CYP2D7A0A087X1C5 515 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SSX5O60225 188 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 IFNA8P32881 189 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 EVI2BP34910 448 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SOX5P35711 763 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 GOLGA4Q13439 2230 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SPCS2Q15005 226 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 BNIPLQ7Z465 357 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 XXYLT1Q8NBI6 393 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 ACSBG1Q96GR2 724 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 SH3GL2Q99962 352 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 C7orf25Q9BPX7 421 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 CARD9Q9H257 536 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 STRN4Q9NRL3 753 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 YEATS2Q9ULM3 1422 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 ARID1BQ8NFD5 2236 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 F8W031 263 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms