RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ABHD14A-ACY1A0A1B0GW23 586 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 PP2D1A8MPX8 630 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 MAGEB2O15479 319 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 MED24O75448 989 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 SLITRK3O94933 977 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 SYT1P21579 422 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 NLRP11P59045 1033 aaKnown RBP14.01□□□□□ -0.17
CLN6-225ENST00000638144 ORC2Q13416 577 aaPredicted RBP14.01□□□□□ -0.17
CLN6-225ENST00000638144 IL17AQ16552 155 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 XKR9Q5GH70 373 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 FAM173BQ6P4H8 233 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 TSHZ1Q6ZSZ6 1077 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 SPRED2Q7Z698 418 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 HERC6Q8IVU3 1022 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 PIGOQ8TEQ8 1089 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 LINC01599Q8WXQ3 324 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 SCLT1Q96NL6 688 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 SLC9A7Q96T83 725 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 HSD17B14Q9BPX1 270 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 ZSWIM4Q9H7M6 989 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 NOC2LQ9Y3T9 749 aaKnown RBP14.01□□□□□ -0.17
CLN6-225ENST00000638144 TRANK1O15050 2925 aa14.01□□□□□ -0.17
CLN6-225ENST00000638144 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14□□□□□ -0.17
CLN6-225ENST00000638144 LCHNA4D1U4 455 aa14□□□□□ -0.17
CLN6-225ENST00000638144 GPR32O75388 356 aa14□□□□□ -0.17
CLN6-225ENST00000638144 CSDE1O75534 798 aaKnown RBP14□□□□□ -0.17
CLN6-225ENST00000638144 UPP2O95045 317 aa14□□□□□ -0.17
CLN6-225ENST00000638144 CA3P07451 260 aa14□□□□□ -0.17
CLN6-225ENST00000638144 SPATA31C1P0DKV0 1188 aa14□□□□□ -0.17
CLN6-225ENST00000638144 FGFR4P22455 802 aa14□□□□□ -0.17
CLN6-225ENST00000638144 PAK2Q13177 524 aa14□□□□□ -0.17
CLN6-225ENST00000638144 RILPL1Q5EBL4 403 aa14□□□□□ -0.17
CLN6-225ENST00000638144 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
CLN6-225ENST00000638144 KSR1Q8IVT5 923 aa14□□□□□ -0.17
CLN6-225ENST00000638144 C4orf19Q8IY42 314 aa14□□□□□ -0.17
CLN6-225ENST00000638144 NME8Q8N427 588 aa14□□□□□ -0.17
CLN6-225ENST00000638144 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
CLN6-225ENST00000638144 TMEM143Q96AN5 459 aa14□□□□□ -0.17
CLN6-225ENST00000638144 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
CLN6-225ENST00000638144 PADI3Q9ULW8 664 aa14□□□□□ -0.17
CLN6-225ENST00000638144 MYH15Q9Y2K3 1946 aa14□□□□□ -0.17
CLN6-225ENST00000638144 KDM3AQ9Y4C1 1321 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLN6-225ENST00000638144 MAFO75444 373 aaPredicted RBP13.99□□□□□ -0.17
CLN6-225ENST00000638144 HSP90AA1P07900 732 aaKnown RBP13.99□□□□□ -0.17
CLN6-225ENST00000638144 PDCP20941 246 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 TMOD1P28289 359 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 CDC25AP30304 524 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 POLGP54098 1239 aaPredicted RBP13.99□□□□□ -0.17
CLN6-225ENST00000638144 NFX1Q12986 1120 aaKnown RBP13.99□□□□□ -0.17
CLN6-225ENST00000638144 RESTQ13127 1097 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 EMC2Q15006 297 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 RAB30Q15771 203 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 CATSPER3Q86XQ3 398 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 GUCD1Q96NT3 240 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 ZBED2Q9BTP6 218 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 ADAMTS10Q9H324 1103 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 SEMA6BQ9H3T3 888 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 CERS4Q9HA82 394 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 MSRAQ9UJ68 235 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 MTMR6Q9Y217 621 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 COL6A3P12111 3177 aa13.99□□□□□ -0.17
CLN6-225ENST00000638144 IGKV6-21A0A0C4DH24 114 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 TLL1O43897 1013 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 MGEA5O60502 916 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 USO1O60763 962 aaKnown RBP13.98□□□□□ -0.17
CLN6-225ENST00000638144 RPS6KA5O75582 802 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 AMHP03971 560 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 RPLP2P05387 115 aaKnown RBP13.98□□□□□ -0.17
CLN6-225ENST00000638144 CCT6AP40227 531 aaKnown RBP13.98□□□□□ -0.17
CLN6-225ENST00000638144 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLN6-225ENST00000638144 GPC3P51654 580 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 ATP2C1P98194 919 aaPredicted RBP13.98□□□□□ -0.17
CLN6-225ENST00000638144 GRIN2CQ14957 1233 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 ECM1Q16610 540 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 PPP2R2DQ66LE6 453 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 GPR153Q6NV75 609 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 FAM228AQ86W67 206 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 RHPN2Q8IUC4 686 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 NEK9Q8TD19 979 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 NLRP7Q8WX94 980 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 APBB2Q92870 758 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 CCDC43Q96MW1 224 aaKnown RBP13.98□□□□□ -0.17
CLN6-225ENST00000638144 TMX1Q9H3N1 280 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 ZNF576Q9H609 170 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 XPNPEP1Q9NQW7 623 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 MTMR10Q9NXD2 777 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 SUCLA2Q9P2R7 463 aaPredicted RBP13.98□□□□□ -0.17
CLN6-225ENST00000638144 LRWD1Q9UFC0 647 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 TTC3P53804 2025 aa13.98□□□□□ -0.17
CLN6-225ENST00000638144 EYSQ5T1H1 3165 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 A0A087WZ62 844 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 VWA3AA6NCI4 1184 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 STX6O43752 255 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 EFCAB14O75071 495 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 LYPLA2O95372 231 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 GJB5O95377 273 aa13.97□□□□□ -0.17
CLN6-225ENST00000638144 SLC34A2O95436 690 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms