RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 KCNK12Q9HB15 430 aa20.83■□□□□ 0.93
CLN6-212ENST00000636020 PKD2L1Q9P0L9 805 aa20.83■□□□□ 0.93
CLN6-212ENST00000636020 RCAN3Q9UKA8 241 aa20.83■□□□□ 0.93
CLN6-212ENST00000636020 PCDHB15Q9Y5E8 787 aa20.83■□□□□ 0.93
CLN6-212ENST00000636020 CXCL14O95715 111 aa20.82■□□□□ 0.92
CLN6-212ENST00000636020 DSC3Q14574 896 aa20.82■□□□□ 0.92
CLN6-212ENST00000636020 KIAA0319LQ8IZA0 1049 aa20.82■□□□□ 0.92
CLN6-212ENST00000636020 CUL5Q93034 780 aa20.82■□□□□ 0.92
CLN6-212ENST00000636020 CNNM2Q9H8M5 875 aa20.82■□□□□ 0.92
CLN6-212ENST00000636020 UBIAD1Q9Y5Z9 338 aa20.82■□□□□ 0.92
CLN6-212ENST00000636020 HOXA2O43364 376 aa20.81■□□□□ 0.92
CLN6-212ENST00000636020 EPCAMP16422 314 aa20.81■□□□□ 0.92
CLN6-212ENST00000636020 KLRC1P26715 233 aa20.81■□□□□ 0.92
CLN6-212ENST00000636020 OTOP3Q7RTS5 596 aa20.81■□□□□ 0.92
CLN6-212ENST00000636020 PLPPR4Q7Z2D5 763 aa20.81■□□□□ 0.92
CLN6-212ENST00000636020 SLC39A11Q8N1S5 342 aa20.81■□□□□ 0.92
CLN6-212ENST00000636020 LRRC43Q8N309 656 aa20.81■□□□□ 0.92
CLN6-212ENST00000636020 FANCMQ8IYD8 2048 aa20.81■□□□□ 0.92
CLN6-212ENST00000636020 DENND4AQ7Z401 1863 aa20.81■□□□□ 0.92
CLN6-212ENST00000636020 CHD6Q8TD26 2715 aa20.8■□□□□ 0.92
CLN6-212ENST00000636020 MAP1BP46821 2468 aaKnown RBP20.8■□□□□ 0.92
CLN6-212ENST00000636020 KRBA1A5PL33 1030 aa20.8■□□□□ 0.92
CLN6-212ENST00000636020 STK25O00506 426 aa20.8■□□□□ 0.92
CLN6-212ENST00000636020 MTMR1Q13613 665 aa20.8■□□□□ 0.92
CLN6-212ENST00000636020 ZC3H14Q6PJT7 736 aaKnown RBP20.8■□□□□ 0.92
CLN6-212ENST00000636020 TMC5Q6UXY8 1006 aa20.8■□□□□ 0.92
CLN6-212ENST00000636020 FAM228AQ86W67 206 aa20.8■□□□□ 0.92
CLN6-212ENST00000636020 SLC22A17Q8WUG5 538 aa20.8■□□□□ 0.92
CLN6-212ENST00000636020 JPH1Q9HDC5 661 aaPredicted RBP20.8■□□□□ 0.92
CLN6-212ENST00000636020 WNT16Q9UBV4 365 aa20.8■□□□□ 0.92
CLN6-212ENST00000636020 MAFGO15525 162 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 NARSO43776 548 aaKnown RBP20.79■□□□□ 0.92
CLN6-212ENST00000636020 SP9P0CG40 484 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 STAT5BP51692 787 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 BMS1Q14692 1282 aaKnown RBP20.79■□□□□ 0.92
CLN6-212ENST00000636020 IMMTQ16891 758 aaKnown RBP20.79■□□□□ 0.92
CLN6-212ENST00000636020 ANKRD45Q5TZF3 282 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 CYB5R4Q7L1T6 521 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 GPR149Q86SP6 731 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 SUMF1Q8NBK3 374 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 PIBF1Q8WXW3 757 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 JADE2Q9NQC1 790 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 SLC9A2Q9UBY0 812 aa20.79■□□□□ 0.92
CLN6-212ENST00000636020 SDSP20132 328 aa20.78■□□□□ 0.92
CLN6-212ENST00000636020 CA8P35219 290 aa20.78■□□□□ 0.92
CLN6-212ENST00000636020 TBC1D8BQ0IIM8 1120 aa20.78■□□□□ 0.92
CLN6-212ENST00000636020 CCDC149Q6ZUS6 474 aa20.78■□□□□ 0.92
CLN6-212ENST00000636020 ABI1Q8IZP0 508 aa20.78■□□□□ 0.92
CLN6-212ENST00000636020 IGSF9Q9P2J2 1179 aa20.78■□□□□ 0.92
CLN6-212ENST00000636020 IRAK3Q9Y616 596 aa20.78■□□□□ 0.92
CLN6-212ENST00000636020 CRYBB1P53674 252 aaPredicted RBP20.77■□□□□ 0.92
CLN6-212ENST00000636020 ACTR2P61160 394 aa20.77■□□□□ 0.92
CLN6-212ENST00000636020 CABP7Q86V35 215 aa20.77■□□□□ 0.92
CLN6-212ENST00000636020 AUTS2Q8WXX7 1259 aa20.77■□□□□ 0.92
CLN6-212ENST00000636020 RILPL2Q969X0 211 aa20.77■□□□□ 0.92
CLN6-212ENST00000636020 ZBP1Q9H171 429 aa20.77■□□□□ 0.92
CLN6-212ENST00000636020 ZBTB47Q9UFB7 747 aaPredicted RBP20.77■□□□□ 0.92
CLN6-212ENST00000636020 CACNA1IQ9P0X4 2223 aa20.77■□□□□ 0.91
CLN6-212ENST00000636020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.76■□□□□ 0.91
CLN6-212ENST00000636020 CFHP08603 1231 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 TROAPQ12815 778 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 KIZQ2M2Z5 673 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 CLLU1OSQ5K130 101 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 ECHDC2Q86YB7 292 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 VPS52Q8N1B4 723 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 TMEM87AQ8NBN3 555 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 OSMRQ99650 979 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 DSCC1Q9BVC3 393 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 TBC1D17Q9HA65 648 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 SENP2Q9HC62 589 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 DLGAP2Q9P1A6 1054 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 EVPLQ92817 2033 aa20.76■□□□□ 0.91
CLN6-212ENST00000636020 NT5C1B-RDH14C9J2C7 533 aa20.75■□□□□ 0.91
CLN6-212ENST00000636020 METAP2P50579 478 aaKnown RBP eCLIP20.75■□□□□ 0.91
CLN6-212ENST00000636020 ATXN1P54253 815 aaKnown RBP20.75■□□□□ 0.91
CLN6-212ENST00000636020 ST3GAL2Q16842 350 aa20.75■□□□□ 0.91
CLN6-212ENST00000636020 C1orf210Q8IVY1 113 aa20.75■□□□□ 0.91
CLN6-212ENST00000636020 PPP1R16BQ96T49 567 aa20.75■□□□□ 0.91
CLN6-212ENST00000636020 SFXN1Q9H9B4 322 aa20.75■□□□□ 0.91
CLN6-212ENST00000636020 CHD8Q9HCK8 2581 aa20.75■□□□□ 0.91
CLN6-212ENST00000636020 HBP1O60381 514 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 ATG7O95352 703 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 DCNP07585 359 aaKnown RBP20.74■□□□□ 0.91
CLN6-212ENST00000636020 SDHBP21912 280 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 RFX1P22670 979 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 ALDH7A1P49419 539 aaKnown RBP20.74■□□□□ 0.91
CLN6-212ENST00000636020 SLC26A2P50443 739 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 BCAR1P56945 870 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 GIT2Q14161 759 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 SPECC1Q5M775 1068 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 CWC27Q6UX04 472 aaKnown RBP20.74■□□□□ 0.91
CLN6-212ENST00000636020 RSAD2Q8WXG1 361 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 TMEM169Q96HH4 297 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 KCNH7Q9NS40 1196 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 CA14Q9ULX7 337 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 NFASCO94856 1347 aa20.74■□□□□ 0.91
CLN6-212ENST00000636020 BAHCC1Q9P281 2608 aa20.73■□□□□ 0.91
CLN6-212ENST00000636020 GPR32O75388 356 aa20.73■□□□□ 0.91
CLN6-212ENST00000636020 CTSAP10619 480 aa20.73■□□□□ 0.91
CLN6-212ENST00000636020 POLGP54098 1239 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms