RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 CYP39A1Q9NYL5 469 aa19.32■□□□□ 0.68
PCF11-207ENST00000624931 RBPJLQ9UBG7 517 aa19.32■□□□□ 0.68
PCF11-207ENST00000624931 LRWD1Q9UFC0 647 aa19.32■□□□□ 0.68
PCF11-207ENST00000624931 PCDHA13Q9Y5I0 950 aa19.32■□□□□ 0.68
PCF11-207ENST00000624931 AGPSO00116 658 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 PJA2O43164 708 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 ARP10275 920 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 CETPP11597 493 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 PLCG1P19174 1290 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 GTF2A2P52657 109 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 TKFCQ3LXA3 575 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 ANKRD40Q6AI12 368 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 RIOX2Q8IUF8 465 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 CAVIN3Q969G5 261 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 RMDN3Q96TC7 470 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 MOV10L1Q9BXT6 1211 aaKnown RBP19.31■□□□□ 0.68
PCF11-207ENST00000624931 GPBP1L1Q9HC44 474 aaPredicted RBP19.31■□□□□ 0.68
PCF11-207ENST00000624931 PXMP2Q9NR77 195 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 PVALEFA0A1B0GWK0 134 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 PDHXO00330 501 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 EBAG9O00559 213 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 ITGB5P18084 799 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 MRPS9P82933 396 aaKnown RBP19.31■□□□□ 0.68
PCF11-207ENST00000624931 PABPC4Q13310 644 aaKnown RBP eCLIP19.31■□□□□ 0.68
PCF11-207ENST00000624931 PGM5Q15124 567 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 Q3C1V9 767 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 CEP55Q53EZ4 464 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 MIIPQ5JXC2 388 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 NCAPG2Q86XI2 1143 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 PNMA5Q96PV4 448 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 IFIH1Q9BYX4 1025 aaKnown RBP19.31■□□□□ 0.68
PCF11-207ENST00000624931 LUC7LQ9NQ29 371 aaKnown RBP19.31■□□□□ 0.68
PCF11-207ENST00000624931 PKD2L1Q9P0L9 805 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 PCDHA12Q9UN75 941 aa19.31■□□□□ 0.68
PCF11-207ENST00000624931 PASKQ96RG2 1323 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 PDE2AO00408 941 aaPredicted RBP19.3■□□□□ 0.68
PCF11-207ENST00000624931 KIF3CO14782 793 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 MYCLP12524 364 aaPredicted RBP19.3■□□□□ 0.68
PCF11-207ENST00000624931 SKOR1P84550 965 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 GRB10Q13322 594 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 VWA3BQ502W6 1294 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 CCDC181Q5TID7 509 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 ARHGEF16Q5VV41 709 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 CENPPQ6IPU0 288 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 FOXR1Q6PIV2 292 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 RASAL3Q86YV0 1011 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 SPATA4Q8NEY3 305 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 SNX29Q8TEQ0 813 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 CALML4Q96GE6 196 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 PDCD2LQ9BRP1 358 aa19.3■□□□□ 0.68
PCF11-207ENST00000624931 ATXN2Q99700 1313 aaKnown RBP19.3■□□□□ 0.68
PCF11-207ENST00000624931 SSU72P8A0A1W2PR75 194 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 MACROD2A1Z1Q3 448 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 RCCD1A6NED2 376 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 HSF2BPO75031 334 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 IRAK1P51617 712 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 ASIC1P78348 528 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 SPIRE1Q08AE8 756 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 ECM1Q16610 540 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 MAN2A1Q16706 1144 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 CHST13Q8NET6 341 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 RUFY1Q96T51 708 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 PTPN18Q99952 460 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 MXRA8Q9BRK3 442 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 CAPS2Q9BXY5 557 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 WDR11Q9BZH6 1224 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 DEF6Q9H4E7 631 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 MAP3K20Q9NYL2 800 aaKnown RBP19.29■□□□□ 0.68
PCF11-207ENST00000624931 STK17AQ9UEE5 414 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 VAV3Q9UKW4 847 aa19.29■□□□□ 0.68
PCF11-207ENST00000624931 ERCC3P19447 782 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 CNTN2Q02246 1040 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 C2orf54Q08AI8 447 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 PCNX4Q63HM2 1172 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 SND1Q7KZF4 910 aaKnown RBP eCLIP19.28■□□□□ 0.68
PCF11-207ENST00000624931 TADA2BQ86TJ2 420 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 SLFN12Q8IYM2 578 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 SAMD3Q8N6K7 520 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 OSBPL9Q96SU4 736 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 ASTN1O14525 1302 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 MEIS1O00470 390 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 TBX3O15119 743 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 ZBTB48P10074 688 aaPredicted RBP19.28■□□□□ 0.68
PCF11-207ENST00000624931 LRRC63Q05C16 580 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 PSMD2Q13200 908 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 MAPK8IP2Q13387 824 aaPredicted RBP19.28■□□□□ 0.68
PCF11-207ENST00000624931 KCNK18Q7Z418 384 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 ANKRD35Q8N283 1001 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 C1orf131Q8NDD1 294 aaKnown RBP19.28■□□□□ 0.68
PCF11-207ENST00000624931 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.28■□□□□ 0.68
PCF11-207ENST00000624931 SYN2Q92777 582 aaPredicted RBP19.28■□□□□ 0.68
PCF11-207ENST00000624931 RAB34Q9BZG1 259 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
PCF11-207ENST00000624931 STIM2Q9P246 746 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 SIK3Q9Y2K2 1263 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 UBIAD1Q9Y5Z9 338 aa19.28■□□□□ 0.68
PCF11-207ENST00000624931 ZNF185O15231 689 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 ZNF157P51786 506 aaPredicted RBP19.27■□□□□ 0.68
PCF11-207ENST00000624931 KIF11P52732 1056 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 PDIA5Q14554 519 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms